Thermococcus sp. AM4: TAM4_564
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Entry
TAM4_564 CDS
T01638
Name
(GenBank) radical SAM family protein
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
tha
Thermococcus sp. AM4
Brite
KEGG Orthology (KO) [BR:
tha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tha03016
]
TAM4_564
Enzymes [BR:
tha01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
TAM4_564
Transfer RNA biogenesis [BR:
tha03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
TAM4_564
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Gene cluster
GFIT
Motif
Pfam:
Wyosine_form
Radical_SAM
Flu_PB2_1st
Hydrolase
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
EEB74619
UniProt:
B7R050
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All DBs
Position
complement(100946..101947)
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AA seq
333 aa
AA seq
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MAIVVKANPNMPEEIALLFRKQHYELVGRHSGVKLCHWLKESLTKGRFCYKQKFYGIASH
RCLQMTPVLAWCTHNCIFCWRPMEGFLGTELPQPWDDPAFIVEESIKAQRKLLVGYKGNP
KVPKEKFEEAWNPKHAAISLSGEPMLYPYMGDLVEEFHKRGFTTFIVTNGTVPERLEEMI
REDKLPTQFYVSLTAPDIETYNRVNVPMIPDGWEKIKETLKLMRDAETRTVIRLTLVKGE
NMHSPEKYAKLIKIANPMFVEAKAYMFVGFSRNRLTINNMPRHEEIKAFAEELVKHLPGY
HIEDEYEPSRVVLIMRDDVDPRGRGLTGRFIAD
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggcgatagtggttaaggcaaacccgaacatgcccgaggaaatcgcgctcctctttagg
aaacagcactacgagctcgtcggcaggcacagcggcgttaagctctgccactggctcaag
gagagccttaccaagggccgcttctgctacaagcagaagttctacggcatagcgagccac
agatgccttcagatgacgccggtcttggcctggtgcacccacaactgcatcttctgctgg
cgcccgatggagggcttcctcggaactgaactgccccagccctgggacgacccggctttc
atcgtcgaggagagcataaaggcccagaggaagcttctcgttggctacaagggcaacccg
aaagttccgaaggagaagttcgaggaagcgtggaacccgaagcacgcggcgattagctta
tcgggtgagccgatgctctatccgtacatgggcgaccttgttgaggagttccacaagagg
ggcttcacgaccttcatagtcaccaacggaaccgttccggagaggctggaggagatgatt
agggaggacaaacttccaacgcagttttacgtctcgctgaccgctcctgacatcgagacc
tacaaccgcgtcaacgtcccgatgattcccgacggctgggagaagataaaggagactctc
aagctcatgcgcgacgcggaaacaaggacggtaataaggctcaccctcgtgaagggcgag
aacatgcacagtcctgaaaagtacgccaagctgattaagatagccaacccgatgttcgtc
gaggccaaagcctacatgttcgtcggcttctcgcggaacaggctcacaatcaacaacatg
ccgaggcacgaggaaatcaaagctttcgccgaggagctcgtgaagcatttgcccggctac
cacatcgaggacgagtacgagccgagcagggtcgtgttaatcatgcgcgacgacgtagat
ccaaggggaaggggattgaccggaaggttcatcgccgattga
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