Thalassococcus sp. S3: CFI11_16820
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Entry
CFI11_16820 CDS
T05844
Symbol
choW
Name
(GenBank) choline ABC transporter permease subunit
KO
K02001
glycine betaine/proline transport system permease protein
Organism
thaa
Thalassococcus sp. S3
Pathway
thaa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
thaa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CFI11_16820 (choW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thaa02000
]
CFI11_16820 (choW)
Transporters [BR:
thaa02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
CFI11_16820 (choW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
SVM_signal
Motif
Other DBs
NCBI-ProteinID:
QBF32870
UniProt:
A0A4P6MJ85
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All DBs
Position
3389384..3390217
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AA seq
277 aa
AA seq
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MDWLTDNKIPIGRTAADIFDWLQINGGWFFDGLSDGLDAMIEAILWVLQTPHPLIVVAVF
AGLTWALQRSWKTVLFVVLGFLFILNQGYWEETTESLTLVLSACVVCMGIGVPIGIAAAH
RPALYRAMRPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLIATVIFVLPAPIRLTHLGVTS
TPKPLLEAAQAFGATPRQTLWKVELPYALPQIMTGLNQTIMLSLSMVVIAALVGADGLGV
PVVRALNQVNTALGFESGFIIVVVAIMLDRMLRMERK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggactggctgaccgacaacaagatcccgattgggcgcaccgccgccgatatcttcgac
tggctgcagatcaacgggggctggttctttgacgggctgtcagacggtctggacgcgatg
atcgaggcgatcctctgggtgctgcaaacaccgcatccgctgatcgtggtcgcggtcttt
gccgggctgacatgggccttgcaacgcagctggaaaacggtgctgttcgtggtgctcggc
ttcctctttatcctcaaccagggctattgggaggagacgacggaaagcctgacgctggtc
ctgtcggcctgcgtcgtctgcatggggatcggcgtgcccatcggcatcgccgcggcgcac
agacccgccctttaccgcgcgatgcggcctgtgctggacctgatgcagactctgccgacc
ttcgtctatcttattccggccattgtctttttcgggatcggcatggtgccaggcctgatc
gccacggtgatcttcgtcttgcccgccccgatcaggctgacacatctgggcgtgacctct
acacccaagccgctgcttgaggctgcgcaagcgtttggcgccaccccgcgccagacgctt
tggaaggtggaactgccctatgccctgccccagatcatgacgggtctgaaccaaacgatc
atgctgtcgctgtcgatggtggtgatcgcggcccttgtgggcgccgacgggctgggggtg
ccggtggtgcgcgccttgaaccaggtgaacacggccctcgggtttgagagcgggtttatc
atcgtggtcgtcgcaatcatgctggaccggatgctgcggatggagcggaagtga
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