Thalassotalea sp. LPB0316: LP316_15555
Help
Entry
LP316_15555 CDS
T08426
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
thab
Thalassotalea sp. LPB0316
Pathway
thab01501
beta-Lactam resistance
thab01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
thab00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LP316_15555
01503 Cationic antimicrobial peptide (CAMP) resistance
LP316_15555
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thab02000
]
LP316_15555
01504 Antimicrobial resistance genes [BR:
thab01504
]
LP316_15555
Transporters [BR:
thab02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LP316_15555
Antimicrobial resistance genes [BR:
thab01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LP316_15555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Patched
MMPL
Motif
Other DBs
NCBI-ProteinID:
QOL25683
UniProt:
A0A7L9S5P5
LinkDB
All DBs
Position
complement(3461751..3464855)
Genome browser
AA seq
1034 aa
AA seq
DB search
MISQTFIERPKFAFVISIVISIAGLLAMFMLPVNMYPEITPPQIQITAVYPGASAQVVEE
SVIRPIEEQVNGVEDMMYIESSANNNGTANITVYFKVGTDDDIAQVNVQNRVSLATSSLP
AEVTRQGVNVKKKSSAMLLGVNLYSEQENIDQLFLSNYATNYLVEPLGRIKGVASAEVMG
EMTYSMRIWLNPDRMTSLGVTISEVQQALKEQNLIVAAGKLGASPSLPNQQFEYTIQARG
RLKTPDEFGETIIRARKNGSFVRLADIGRIELGSENYAISAKLNDQDTAFLVIYQLPGAN
ATEVAKRVKQEMAKLAERFPDGVNYVVPFDTTEFITRSIDEVKVTLFQAVALVILVVFLF
LQNWRATIIPSLAIPVSLIGTFAFMLAMGYTINTITLFGLVLAIGIVVDDAIIVIENVER
ILKEEKLQIKQAVSKAMKQVGGPIIATTLVLLAVFVPVGFMPGITGELYKQFSVTISFAV
LISSLNALTLSPALCSVLLNEKHMKPIGWLQPFEQMLRRLTGKYSNTVGFLLKRTGGVGV
VVVSVFFATAWLTKEVPTAFVPGEDQGYLFVDIQLPDAASKNRTEKVLEKITPIIKQDPA
VDDVITVAGSSLLGGAGSNNALAIILLKDWEDRVTPELGLRQVIPRLMGQLWSLPDAQIM
VFNPPPIPGLGSSSGFEFKLQDSEGREPALLAQVMNGLIFEANQRPELTQVFSTYRANVP
QYFLEVDRNKAKAQGVALSDIFMTLQAQLGSLYINDFSQFGRTYKVSIQAESQFRQEPSD
LSHYYVRNQDGEMVPLTTLASLKPILGPTTINHFNLYRSASITGQAATGYASGDAIEAME
ELADQLPQGYVFEWAGQSKQEIEAGNLAPVLFGLAIIFVYLFLVAQYESWSIPFSVIAAV
PLALFGAMLALYTLGMANNIYAQVGLVLLIGLSTKTAILIVEFAMELRAQGQSIIDAALN
AATMRFRAVLMTAFSFVLGVLPLVFATGAGAGSRVSLGLTVLAGMTAATIFGTVLIPYFY
LVVQGVRERLKGEV
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgattagtcaaacctttattgaaaggcccaagtttgcctttgttatttcaattgtcatc
tctattgctggcttattggcgatgtttatgttgcccgtcaatatgtacccagaaattacg
ccgccacaaatacaaatcactgcggtttatcccggtgctagtgcgcaagttgtcgaagag
tcggttattaggccgatagaggaacaggttaacggggtcgaagatatgatgtatatcgaa
tcgtcggccaataacaatggcaccgcgaatataaccgtttacttcaaagtgggcaccgat
gatgacattgcccaagttaacgtgcaaaaccgggtttccctagcaacgagctccttacct
gcagaagtgactcgccaaggggttaatgttaagaaaaaatcgagtgccatgttgcttggc
gtcaatttgtacagtgaacaagagaatatcgatcaactgttcttaagtaattacgcgacc
aattacctcgttgaaccactagggcgaatcaaaggcgttgccagtgctgaagtgatgggt
gagatgacatacagtatgcgcatctggcttaaccctgatcgcatgacgtcactaggcgta
accattagcgaagttcaacaagcgttaaaagagcaaaacttgattgttgccgctggtaaa
ttaggcgcttcgccgtcactgccaaatcaacagtttgagtacacaattcaagctagaggt
cggttaaaaacgccggatgagtttggtgaaactattattcgcgcccgtaaaaacggcagc
tttgttcgtcttgccgatattggtcggattgagttaggttctgaaaattacgcaatcagt
gccaaattaaatgatcaagatactgcctttttggtgatctaccaattaccaggtgccaat
gcgacagaagtggcaaaacgggttaaacaagaaatggctaaactggcggagcgcttccct
gatggcgtcaactatgttgtaccttttgacactacagagttcattacgcgctcaattgac
gaagttaaagtgacgctatttcaggcggttgctctagttattctggtggtcttcttattt
ttacaaaattggcgggcaaccattattccatcgcttgcaatacccgtttctcttatcggt
accttcgcttttatgttagctatggggtacaccatcaataccattacattatttggcttg
gtgttggcgatcggcattgtggtcgacgatgcgattatcgttattgaaaatgttgagcgg
attttaaaagaagaaaagctacagattaaacaagcagttagtaaagccatgaagcaagtg
ggtgggccgattatcgcgacaacactcgtcttattggccgtttttgtgccggtcggcttc
atgccgggaataaccggtgaattatacaaacagttttcggtaaccatttcgtttgctgtg
ctaatttcttcactgaacgccttaacattaagtcctgcgttgtgttcagtactgttaaat
gaaaaacacatgaagccgattggctggctacaaccatttgagcagatgttgcgtcgcttg
actggcaagtacagcaatacggttggttttttgttaaagcgcacagggggcgtaggtgtg
gttgtagtgtcggtatttttcgctacggcttggctgacaaaagaagtgccaacagccttt
gttcccggcgaagatcaaggttatttatttgttgatattcaactgcctgatgccgcttca
aaaaatagaacagaaaaggtgttagaaaaaatcaccccgattattaaacaagaccctgcg
gttgatgacgtaatcactgtcgctggctcgtcattgctcggcggtgcaggatcaaacaat
gctttagcgattatcttgctcaaagattgggaagatagagttacgccagagcttggttta
cgacaagttattcctcgtttaatggggcaattatggtcattgcccgatgcgcaaattatg
gtgttcaacccaccaccaattcctggtttaggcagtagctctggctttgagtttaaattg
caagatagcgaagggcgtgagccagcactgttggcgcaagtcatgaatggtttgattttc
gaagccaatcaacgccctgaattaacccaagttttcagtacatatcgcgccaatgtacca
cagtattttttggaagttgaccgcaataaagccaaagcacaaggcgttgcgctttccgat
atttttatgaccttacaagcgcagcttggctcattgtatattaacgatttcagtcaattt
ggccgaacctataaagtcagtattcaagctgaatcccagtttagacaagagccgagtgat
ttgagccattattacgtgcgcaatcaagacggtgaaatggtgccattaacaacgcttgct
agcctaaaacccattttaggccccacaactattaatcattttaacttgtatcgcagcgca
agtattacagggcaagcagcaaccggatatgcctcaggcgacgcaatagaggcgatggaa
gaattggctgatcagttacctcaaggttatgtgtttgagtgggcagggcagtcaaaacag
gaaatagaagcgggtaatttagcgccagtattatttggtttggcgattatcttcgtctat
ttgtttttagttgcacaatacgaaagttggagtattccgttttcggttatagccgcagta
ccgttagccttattcggtgctatgttggcactctacacattggggatggcaaacaatatc
tacgcacaagttggtttagtattattgattggtttgtcgacgaaaacggcaatattaatt
gtcgagtttgccatggagttaagagcgcaaggtcagtcgattatcgacgctgcacttaat
gcggcgactatgcgttttcgcgcagtattgatgactgctttttcgtttgtccttggcgta
ttaccgttagtttttgctacaggtgctggcgctggtagccgagtttcattgggtttaact
gtactcgcggggatgacagccgcgacaattttcggcacggtattgatcccatatttctat
ttggttgttcagggagtgagagaacgccttaagggcgaggtataa
DBGET
integrated database retrieval system
