Thauera sp. GDN1: CKCBHOJB_00333
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Entry
CKCBHOJB_00333 CDS
T09925
Symbol
nifJ
Name
(GenBank) Pyruvate-flavodoxin oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
thag
Thauera sp. GDN1
Pathway
thag00010
Glycolysis / Gluconeogenesis
thag00020
Citrate cycle (TCA cycle)
thag00620
Pyruvate metabolism
thag00650
Butanoate metabolism
thag01100
Metabolic pathways
thag01110
Biosynthesis of secondary metabolites
thag01120
Microbial metabolism in diverse environments
thag01200
Carbon metabolism
thag01210
2-Oxocarboxylic acid metabolism
Module
thag_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
thag00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
CKCBHOJB_00333 (nifJ)
00020 Citrate cycle (TCA cycle)
CKCBHOJB_00333 (nifJ)
00620 Pyruvate metabolism
CKCBHOJB_00333 (nifJ)
00650 Butanoate metabolism
CKCBHOJB_00333 (nifJ)
Enzymes [BR:
thag01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
CKCBHOJB_00333 (nifJ)
BRITE hierarchy
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4
Fer4_7
Fer4_16
Fer4_6
Fer4_9
Fer4_10
Fer4_21
TPP_enzyme_C
Fer4_2
Fer4_8
Fer4_17
Fer4_18
Fer4_4
EutN_CcmL
Transketolase_C
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
WEN40800
LinkDB
All DBs
Position
complement(362341..366012)
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AA seq
1223 aa
AA seq
DB search
MKPMITIDGNEAAASVAFRASEVIAIYPITPSSNMGELADEWAAHGKANIWGSVPRVVEM
QSEGGAAGAVHGALQAGALATTFTASQGLLLMIPNMYKIAGELTPTVFHVAARALATHAL
SIFGDHSDVMSTRATGFALLASNSVQEAHDFAAIATAATLAGRVPVLHFFDGFRTSHEVS
KIDFIPDEVLHALLPDARIAAQRARALSPEHPVIRGTSQNPDVFFQAREAQNPWFDAFPA
VVQQAMDEFAALTGRRYTLFDYVGAPDAERVIVIMGSGADTVEETVAHLNARGDKVGVLK
VRLFRPFAPAALLAALPQSVRSLAVLDRCKEPGADGEPLFKDVMVALAEDQAGAAPRFAA
MPKVIGGRYGLGSKEFNPAMVCAIFAELQQAAPRRRFTIGIEDDVTGLSLPWDRAFRTDA
TASAFAAVFYGLGSDGTVSANKNSIKIIGDETALFAQGYFVYDSKKSGAMTVSHLRFGPQ
PIRSAYLTGAGDAKFVACHQPLFIAQHDLLAHAAPGAVFLLNASEPADKVWAALPPTMQR
TMVEKKISFWVIDAYQVALEAGMGRRINTVMQTCFFAISGILPQDQAIAAIKRAVEKTYG
RKGRRIAEQNYRAIDATVAALQRVAVPETLAALDAVTGEAPITAAGLDAFTRRVTIPLIQ
GKGDALPVSLLPVDGTWPTGTARHEKRNLALEIPVWDEKLCTQCGKCVFVCPHSAIRAKV
FPAERVADAPAAFKHVPARSKDYAAGTHMSYQVAPEDCTGCTLCVDVCPIRDKSNVSHKA
LNMAPQPPLRAQEAENWDYFLRLPDLARRDAKRSTIPGSMLLQPLFEFSGACVGCGETPY
IRLATQLFGDRMMVANATGCSSIYGGNLPTTPYTTDADGRGPAWNNSLFEDNAEFGLGMR
LATDQLAAAARTQLQALAATQGEALGNELVAALLDADQHSEAGIHEQRERVALLKQKLAT
IDTPAARQLAALSEYLIRRSVWIIGGDGWAYDIGFGGLDHVLASGEDVNILVLDTEVYSN
TGGQNSKATPMGAVAKFAAGGKPAHKKDLAKIAMDYENVFVAKVAYGAKDVHTLKAFLDA
EGYPGVSIIIAYSPCIAHGVDMSFNLHQQDLAVKSGHWPLLRYDPRLRAQGRNPLSVDSA
APSVPYRDFARNEARFTVLERQNPEASERFLDEAERHARHRHHEYVELAALPGVDETEPK
DAATDGAAQDAAPAARTGDTQNG
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgatgatcaccatcgacggcaacgaggccgccgcctcagttgccttccgcgca
tccgaagtgatcgcgatctacccgatcacgccctcgtccaacatgggcgagctcgccgac
gaatgggccgcccacggcaaggccaacatctggggcagcgtgccgcgggtggtggagatg
cagtccgaaggcggcgctgccggcgcggtccacggtgcactgcaggcaggcgccctggcg
accaccttcaccgcgtcgcagggcctgctgctgatgatcccgaacatgtacaagatcgcc
ggcgaactcacgcccacggtcttccatgtcgcggcgcgcgcgctcgccacccatgcgctg
tcgatcttcggcgaccactccgacgtgatgtccacccgcgccaccggcttcgcgctgctc
gcgtccaactcggtgcaggaggcgcacgacttcgccgccatcgccaccgcggccacgctc
gccgggcgggtgccggtgctgcacttcttcgacggcttccgcacctcgcacgaggtgtcg
aagatcgacttcatccccgacgaggtcctgcacgcgctgctgccggacgcgcgcatcgcc
gcccagcgcgcacgcgcgctgtcgcccgagcacccggtgatccgcggcacctcgcagaac
ccggacgtgttcttccaggcgcgcgaggcgcagaacccctggttcgacgccttccccgcc
gtggtgcagcaggcgatggacgaattcgccgcgctcaccggccgccgctacacgctgttc
gactacgtcggcgcaccggatgccgagcgcgtgatcgtgatcatgggttcgggcgcggac
acggtggaagagaccgtcgcccacctcaacgcccgcggcgacaaggtcggcgtgctcaaa
gtgcgcctgttccgccccttcgcgcccgccgccctgctcgcggccttgccgcagagcgtg
cgcagcctggccgtgctcgaccgctgcaaggaacccggcgccgacggcgagccgctgttc
aaggacgtgatggtggcgctggccgaggaccaggcgggcgcggcgccgcgctttgccgcg
atgccgaaggtgatcggcggccgctacggcctgggctccaaggaattcaacccggccatg
gtgtgcgcgatctttgccgagctgcagcaggccgcgccgcgccgccggttcaccatcggc
atcgaggacgacgtcaccggcctgtccctgccctgggaccgcgccttccgcaccgacgcc
accgccagcgccttcgccgcggtgttctacggcctgggttcggacggcacggtgtcggcc
aacaagaactcgatcaagatcatcggcgacgagaccgcgctcttcgcccagggctatttc
gtctacgactcgaagaaatccggcgcgatgacggtgtcgcacctgcgcttcggcccgcag
ccgatccgctccgcctacctcaccggcgcgggcgatgcgaagttcgtcgcctgccaccag
ccgctgttcatcgcgcagcacgacctgctcgcccacgccgcgccgggcgcggtgttcctg
ctcaacgccagcgagcccgccgacaaggtatgggccgcgctgccgccgaccatgcagcgc
accatggtggagaagaagatcagcttctgggtcatcgatgcctaccaggtcgcgctggag
gccggcatggggcggcgcatcaacaccgtgatgcagacctgcttcttcgccatctccggc
atcctgccgcaggaccaggcgatcgccgcaatcaagcgcgcggtcgagaagacctacggc
cgcaagggccgccgcatcgccgagcagaactaccgcgccatcgacgccaccgtggccgcg
ctgcagcgggtggcggtgcccgaaacgctggccgcgctcgatgccgtgacaggcgaagcg
ccgatcacggccgccggcctcgatgccttcacccgccgcgtcaccatcccgctgatccag
ggcaagggcgacgcgctgccggtgtcgctgctgccggtcgacggcacctggccgaccggc
accgcccgccacgagaagcgcaacctcgcgctcgagatcccggtgtgggacgagaagctg
tgcacccagtgcggcaagtgcgtgttcgtgtgcccgcactcggcgatccgcgccaaggtc
ttcccggccgagcgcgtcgccgacgcacctgccgcgttcaagcacgtcccggcgcgcagc
aaggactacgcggcgggcacccacatgagctaccaggtggcgcccgaggattgcaccggg
tgcacgctgtgcgtggacgtgtgcccgatccgcgacaagtcgaacgtgtcgcacaaggcg
ctcaacatggcgccgcagccgccgctgcgcgcgcaggaggccgagaactgggactatttc
ctgcgcctgcccgacctcgcccgccgcgacgccaagcgcagcaccatccccggctcgatg
ctgctgcagccgctgttcgagttctccggcgcctgcgtgggctgcggcgagacgccctac
atccgcctcgccacccagctcttcggcgaccgcatgatggtggccaacgccaccggctgc
tcgtctatctacggcggcaacctgccgaccacgccctacaccaccgacgccgacggccgc
ggcccggcgtggaacaactcgctgttcgaggacaacgccgagttcggcctcggcatgcgc
ctggccaccgaccagctcgccgccgccgcgcgcacgcagttgcaggcgctggcggcgacg
cagggcgaggcgctcggcaatgaactcgtcgccgcgctgctcgacgccgaccagcattcg
gaggccggcatccacgagcaacgcgaacgcgtggcgctgctcaagcagaagctcgcgact
atcgacaccccggccgcgcgccagctcgccgcgctctcggaatacctgatccggcgcagc
gtgtggatcatcggcggcgacggctgggcctacgacatcggcttcggcggcctcgaccac
gtgctggcctcgggcgaggacgtgaacatcctggtgctcgacaccgaggtctattccaac
accggcgggcagaactccaaggccacgccgatgggcgcggtggccaagttcgccgccggc
ggcaagcccgcgcacaagaaggacctcgcaaagatagcgatggactacgagaacgtcttc
gtcgccaaggtggcctacggcgccaaggacgtgcatacgctgaaggccttcctcgacgcc
gagggctacccgggggtgtcgatcatcatcgcctacagcccctgcatcgcccacggcgtg
gacatgtccttcaacctgcaccagcaggatctggcggtgaagtccggccactggccgctg
ctgcgctacgacccacgcctgcgcgcgcagggccgcaacccgctgtcggtggatagcgct
gcgccgagcgtgccctaccgcgatttcgcccgcaacgaggcgcgcttcaccgtgctcgag
cgccagaacccggaggcctccgagcgcttcctcgacgaggccgaacgccacgcccgccac
cgccaccacgagtacgtggagctggccgcgctgcccggggtggacgagactgagcccaag
gacgctgccaccgacggcgccgcacaggacgccgcccccgccgcccgcaccggagacacc
cagaatggctga
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