Thalassospira sp. A40-3: IT893_08860
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Entry
IT893_08860 CDS
T08364
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
thai
Thalassospira sp. A40-3
Pathway
thai02020
Two-component system
thai02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
thai00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IT893_08860
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
IT893_08860
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
thai02035
]
IT893_08860
Bacterial motility proteins [BR:
thai02035
]
Flagellar system
Chemotaxis proteins
MCPs
IT893_08860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
dCache_1
HAMP
COG3_N
DBD_HTH
PhaP_Bmeg
ATG17_like
COG6_N
DUF917_C
SKA1
Motif
Other DBs
NCBI-ProteinID:
QPO13596
LinkDB
All DBs
Position
1957241..1959187
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AA seq
648 aa
AA seq
DB search
MSLNIGSRILLAAAMIVVTTFTAFIFYFDYQQRTYIQNALVAKLTESGSLATAGISSWLD
GRRLLVESLANNIARDSSPTNVSEVASGEAFAESFIFSYFGSADGVMTMYPPDDLPPDYD
PRQRPWYADAVSVGDSTLTEPYTDASTGQLIVTATTPVFDGSNLLGVVGGDIDIGILGDL
VRSIDLGGIGYGFLVNDQGTVLIHPSAEFTLKPLPEVFPDDTPTVKEGMENIIDGTGDQL
FTFFRVNGLPSVNWYLGFALDRDAAYASLTEFRYTAIITAIIAILAIMGLMGLLVRIWVS
RPVMSMTSAMTRLANGQRDVDVPGTELKDEIGAMAAAVLVFKNNAAEVDRLASENEAATR
HAAEARRRAMEQMADNFEKSVLSIVETVADAAEKTQSVATQLSANAEESTARAAAVSSAA
NITTENVQAVASATEELSAAIREIGAQVTQSIEVATEAVSGVNITSATVTELAEAAERIG
KVVGLIQDIAGQTNLLALNATIEAARAGDAGKGFAVVAGEVKSLANQTDKATGDIQVQVD
GIQGSSNRSVSEIRSISGTIERINEFCNAIAAAVEQQGAATQEIADSVQRAASGTQEVSQ
NVSAVSDTANMVSEEANSLLSSSQELRKLAQRLREEVIGFLKSVRDND
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcaatattggtagccggatattgcttgctgcggcaatgatcgttgttacgacg
ttcacggcattcatcttttattttgactatcagcaacgaacatacatccagaatgcgctt
gtggctaaattgaccgagagtggttcgttggccactgccggcatttcaagctggcttgat
ggccggcgcctgttggttgagagcctcgccaacaatattgcccgtgacagttcccccacc
aatgtctctgaagttgcaagcggtgaggcatttgccgagtcatttatcttttcatatttc
ggcagtgctgacggtgtaatgacaatgtatccacccgatgatctgccgcccgactacgac
ccgcgccaacgcccatggtatgcagatgcagtttctgtcggtgacagtacgcttaccgaa
ccctacaccgatgcatccaccggtcagctcattgttacggcaaccacacctgtttttgat
ggatcaaaccttcttggggttgttggcggcgatatcgatattggtatccttggtgatctg
gttcgcagcatcgatctgggcgggatcggatatggctttctggttaatgatcagggaacg
gttctgatccacccaagtgcagaattcacccttaaacccctgcctgaagtgtttcctgac
gacacaccaacggtaaaggaaggcatggagaacatcattgatggcacaggcgatcagttg
ttcacctttttccgcgtcaacggcttgccttctgtaaactggtatctcggctttgcactt
gatcgcgatgccgcatatgcgtcccttaccgagtttcgctacactgcaattattactgcg
atcattgccattctggccataatgggcctgatggggctgctggtacgtatttgggtttcg
cggccggttatgagtatgacgtcggccatgactcgcctcgccaatggtcagagggatgtc
gatgtcccgggaacggaactcaaggacgaaattggcgcaatggccgcggctgttctggtg
tttaaaaacaacgctgcagaagtggaccgtctggcgagcgagaacgaggccgcgactagg
catgcggctgaggcgcgcaggcgcgccatggaacaaatggcagataatttcgagaagagt
gttctttccatagtggaaacagtggctgacgcggccgaaaaaacgcagtcggtcgcaact
cagttatctgccaatgcagaagaatcgacggcccgtgccgccgcagtttcgagtgcagcg
aacataacaacagaaaacgtgcaggccgtggcgtccgcaaccgaagagctttctgctgcc
attcgcgaaattggtgcacaggttacgcaatcaatcgaagttgcgaccgaggcagtttca
ggcgtcaacattacttctgcaacggtcacagagcttgccgaggccgctgagcggatcggc
aaagtcgttggtctcattcaagatattgccggtcaaacaaacctactggcgctaaacgca
accatcgaagcagctcgtgcaggtgatgctggtaagggctttgccgttgttgccggtgag
gtgaaatcgcttgccaatcaaacggacaaggctactggcgatattcaggttcaggtagat
ggtattcaagggtcgtcgaaccgttcagtttccgaaatcaggtctatttccggaacgatc
gagcgaatcaacgaattctgcaatgccattgcagccgcggttgagcaacaaggggctgcg
acacaagagattgcagacagcgttcaacgtgcagcatccggcacacaggaagtctcgcaa
aatgtgtcggccgtctctgataccgccaacatggtaagtgaggaagccaactcgctcctt
tcgtcttcccaggaattgcgaaaacttgcccaacgtctcagggaagaagttatcggcttc
ctgaaatctgtgcgcgacaacgactag
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