Thalassotalea sp. PS06: FNC98_11720
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Entry
FNC98_11720 CDS
T06100
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
thap
Thalassotalea sp. PS06
Pathway
thap00521
Streptomycin biosynthesis
thap00523
Polyketide sugar unit biosynthesis
thap00541
O-Antigen nucleotide sugar biosynthesis
thap01100
Metabolic pathways
thap01110
Biosynthesis of secondary metabolites
thap01250
Biosynthesis of nucleotide sugars
Module
thap_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
thap00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
FNC98_11720 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FNC98_11720 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FNC98_11720 (rfbC)
Enzymes [BR:
thap01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
FNC98_11720 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QDP01947
UniProt:
A0A516HDV8
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Position
complement(2645268..2645813)
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AA seq
181 aa
AA seq
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MKLIDTAIEDVKIIEPQVFGDERGFFMETYRASIIDELTGGKPFVQDNHSKSSQGILRGL
HYQMQSTQGKLVRVVQGEVFDVAVDMRKDSPTFGKWVGEILSAENKRQLWVPEGFAHGFY
VMSETAEFVYKCTDYYAPEHDRSLKWDDPTVAIQWPLVNGEQPLLSAKDEAGKSFEDADK
F
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaattgataccgcaattgaagacgtaaaaatcattgaacctcaagtgtttggt
gatgagcgtggttttttcatggaaacgtatcgcgcaagcatcatcgacgaactgaccggc
ggcaagccgttcgttcaggataaccattctaaatcttcgcaaggaattcttcgtggattg
cattaccaaatgcagtcaacccagggaaagctcgtgcgcgtagtacagggtgaagttttt
gacgtggcggtagatatgcgtaaagattctccgacctttggaaagtgggttggagaaatt
ttgtcagctgaaaataaacgccagctttgggtccctgaaggatttgctcatggtttttat
gtgatgagtgagacggctgagtttgtatacaaatgcacggattattatgcgcctgagcac
gatcgctcattgaaatgggatgatccaaccgttgctatccaatggccactggtaaacggt
gaacagccgttgctgtctgcgaaagatgaagcaggtaaatccttcgaggacgctgataag
ttttaa
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