Pukyongiella litopenaei: C6Y53_17040
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Entry
C6Y53_17040 CDS
T05357
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
thas
Pukyongiella litopenaei
Brite
KEGG Orthology (KO) [BR:
thas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thas03009
]
C6Y53_17040
Enzymes [BR:
thas01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
C6Y53_17040
Ribosome biogenesis [BR:
thas03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
C6Y53_17040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltransf_25
Methyltransf_23
FtsJ
Methyltransf_31
CMAS
Methyltransf_12
PCMT
Motif
Other DBs
NCBI-ProteinID:
AVO39247
UniProt:
A0A2S0MTX0
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All DBs
Position
3500247..3501410
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AA seq
387 aa
AA seq
DB search
MTPAARVQAAIEILDGIGAGRAAEQALTGWARRSRFAGSGDRAAVRDHVFDALRRRRSYA
ALGGGSGGRALMLGAIRAAGGDPDAVFGAGGHAPAALSDAERAGGRDPRTPQERCDMPDW
LWPRLVASLGGEADAAGRALQNRAPVHLRVNLARCDRDAARHALADDGIATRPHPASPTA
LEVTDGARRLRNARAYLDGRVELQDAASQAVVDLLPLKPGMRVLDYCAGGGGKALAMAAR
AAVEIVAHDASPDRMRDLPARADRAGAQITLAATQDLAGLGPFDLVLCDAPCSGSGSWRR
SPEGKWALTEARLAELTGIQRDILHRASACLVPGGLLAYATCSILDDENAQSVAHFLRAH
PGWRQVASRSWPVQHGTDGFFSSHLTG
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaccccggcggcccgcgtgcaggcggcaatcgagatccttgacggtatcggggcgggc
cgggcggccgaacaggcgctgaccggttgggcgcggcgcagccggttcgccggttccggg
gatcgcgccgccgtgcgcgaccatgtgttcgacgcgctgcggcggcggcggtcctatgcg
gcgcttggcggcggatcgggcgggcgcgccctgatgctgggcgcgatacgcgcggcgggc
ggcgacccggacgcggtgttcggtgcgggcggccacgccccggcggcgctgagcgatgcg
gaacgggccggcgggcgcgacccgcgcacaccgcaggagcgctgcgatatgcccgactgg
ctctggccgcgcctggtggcaagcctgggcggcgaggccgacgccgccggtcgggccttg
cagaaccgcgcaccggtgcatctgcgcgtgaacctggcccgctgcgatcgcgacgcggcc
cggcacgccctggcggatgacggcatcgcgacccggccacatcccgcgtcgcccaccgcg
ctcgaagtgaccgacggcgcccgccgcctgcgcaacgcgcgggcctatctcgacggccgg
gtcgaattgcaggacgcggccagccaggcggtcgtcgacctgctgccgctgaaaccgggg
atgcgggtgctggactattgtgccggcgggggcggcaaggcgctggcgatggcggcgcgt
gcggcggtcgagatcgtcgcccatgatgcctcgcccgaccggatgcgcgatcttcccgcc
cgtgccgacagggccggggcgcagatcacgctggcggcgacgcaggatctggcgggcctg
gggccgttcgacctggtgctgtgcgacgcgccctgttcgggcagcgggtcctggcgccgg
tcgcccgagggcaagtgggcgctgaccgaggcccggctggccgaactgaccgggatccag
cgcgacatcctgcatcgcgcgtcggcctgtctcgtgcccggcgggctgttggcctatgcc
acctgttccatcctcgatgacgaaaacgcgcaatccgtcgcgcatttcctgcgcgcgcat
cccggctggcggcaggtcgcgtcgagatcgtggccggttcaacatggcacggacgggttt
ttttcttctcacttgacaggatag
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