Candidatus Tokpelaia hoelldoblerii: BHV28_11020
Help
Entry
BHV28_11020 CDS
T04701
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
thd
Candidatus Tokpelaia hoelldoblerii
Pathway
thd03030
DNA replication
thd03430
Mismatch repair
thd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BHV28_11020 (dnaE)
03430 Mismatch repair
BHV28_11020 (dnaE)
03440 Homologous recombination
BHV28_11020 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thd03032
]
BHV28_11020 (dnaE)
03400 DNA repair and recombination proteins [BR:
thd03400
]
BHV28_11020 (dnaE)
Enzymes [BR:
thd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BHV28_11020 (dnaE)
DNA replication proteins [BR:
thd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BHV28_11020 (dnaE)
DNA repair and recombination proteins [BR:
thd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BHV28_11020 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
AQS41790
UniProt:
A0A1U9JVB1
LinkDB
All DBs
Position
complement(1160807..1164280)
Genome browser
AA seq
1157 aa
AA seq
DB search
MEQAQKQLIHPDFIHLRVHSGYSLLEGALKVDKIVAHAQADKQPAMAITDSSNLFGALEF
TQKCFKVGIQPIIGCQLAVDFADESYDPRLGKIRTLASFSSLVLLAATDEGYANLVSLVS
RAYLDKPEMEPPHLHIDWLADMGQGIIALSGGAGGPVEQALLTDRPDRAEQRLDRLQTIF
GDRLYIELQRHGDYNHTLERKMLDFAYGKALPLVATNEAFFLQREDYEAHDALLAIAEGQ
VVSNDDRRRVTPDHYLKTQGEMAALFADLPEALENTVEIARRCHAFTPTRDPILPHFTGQ
ADDPAAAVAAEAEEMIGQARKGLKHRLETAGLAEGYSVEAYEKRLEYEISIIVRMQFPGY
FLIVSDFIKWAKAHGIPVGPGRGSGAGSLVAYALMITDVDPLRFSLLFERFLNPDRVSMP
DFDIDFCQDRREEVIHYVQEKYGREQVAQIITFGTLQARAVLRDVGRVLEMPYGQVDGLS
KLVPSNPANPVSLTKAVEDEPKFAEEEQKDPVVGRLLDIAKKLEGLYRHASTHAAGIVIG
DRPLWQLVPMYRDPRSDMPVTQFNMKFVEQAGLVKFDFLGLKTLTVLQTAVEFVKRKGVD
INLAHIPLDDGETYAILSRGETVGVFQVESAGMRKALLGMRPDRIEDIIALVALYRPGPM
ENIPTYNARKHGEEEIASIHPKIDYLVKETQGVIVYQEQVMQIAQVLSGYSLGEADLLRR
AMGKKIRAEMDQQRARFVDGAVEGGLGKEQANTIFDLLAKFADYGFNKSHAAAYAIVSYQ
TAYLKAHHPVEFLAASMTYDMSNTDKLNDFRREAERLGIEVVAPSVQTSHRVFEVGENTI
YYSLAAIKGVGEPAVDHIVECRGDKPFANLEDFCERTDPRIVNRRVLESLVNAGALDCFG
IRREVLIAGVDTIIARSQRLSEDQNSGQIDIFGMVSGVSEPLMLPQAEPWLGGEKLHREF
QAVGFYLSAHPLDEYKNLLGKMRVQEWATFAGAVRRGASAGRLAGTVNAKQIRKTRSGNK
MGIVQFSDATGQYEAVLFSEGLAQYGDMLEAGQSVVITVAAEDRPEGVSLRVQTVQSLEG
EAGRVQKAMRLYVRSADTVRQIAGQLKNEGDGAVSLIVIKDQGASEIEIALPKRYKLSPS
LAAALKTVSEVIDVELI
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggcgcaaaaacagctgatacatcccgattttattcatttgcgggtgcattcg
ggctattccctgctggaaggcgcgctgaaagttgataaaattgttgcccatgcgcaagcg
gataaacagcccgcaatggcgataaccgacagcagcaacctgttcggcgcgctggaattt
acgcaaaaatgtttcaaggtggggattcagccgatcattggttgccagctggcggtggat
tttgccgatgaaagctatgatccgcgccttggcaaaatccgcacgctggcgtctttttct
tcgcttgtgctgctggcggcgacggatgagggctatgccaatctggtcagtcttgtcagc
cgtgcctatctcgacaagccggaaatggagccgccgcatcttcatatcgattggctggct
gatatggggcagggcattatcgcgctttccggcggcgctggcgggccagttgaacaggcc
ctgctgacggaccggccggacagagccgaacagcgccttgaccgtttgcagacaatattt
ggtgaccggctttatatcgaactgcaacgccatggtgattataatcatacgcttgagcgc
aaaatgcttgattttgcctacggaaaagccctgccgctggtcgcgaccaatgaagcgttt
tttctgcagcgtgaggattatgaggcgcatgatgcgctgcttgctattgccgaagggcag
gtggtgtccaatgatgaccgccgccgcgtcacaccggaccattatctcaagacacaagga
gagatggcggcgctgtttgccgatctgccggaagcgctggaaaataccgttgaaattgcc
cgccgctgtcatgcctttacgccgacgcgcgaccctatcctgccgcattttaccggtcag
gctgatgacccggcggcggcggtcgctgcagaagctgaggaaatgatcggccaggcgcgc
aaggggctgaagcatcggctggaaactgccggccttgctgaaggttatagtgtcgaagct
tatgaaaagcggctggaatacgagatttccattatcgtccgcatgcagtttccgggctat
tttctcatcgtttccgattttatcaaatgggccaaggcgcatggcattcctgtcggcccc
gggcgcggttccggtgcagggtcgcttgttgcctatgctctgatgatcaccgatgttgat
ccgctgcgcttctctttgctgtttgagcgtttcctcaatcctgaccgcgtttccatgccg
gattttgatattgatttctgtcaggaccggcgtgaggaagtgatccattatgtgcaggaa
aaatatggccgcgaacaagtagcgcagattatcaccttcgggaccttgcaggcgcgtgct
gtgctgcgtgatgtcgggcgggtgctggaaatgccttacggacaggttgacggcttaagc
aagctggtgccgtccaatcctgccaatccggtttcgctgacaaaagcagtggaagatgag
ccgaaatttgccgaggaggagcagaaggacccggttgttggccggttgcttgatattgcg
aaaaagctggaagggctttatcgccacgcttcaactcatgctgccggtattgtgattggg
gaccggcctttatggcaactggtgccgatgtatcgcgatccgcgttctgatatgccggtg
acgcagttcaatatgaaatttgtcgagcaggccgggctggtgaaatttgactttctcggc
ctgaaaaccctgacagttctgcagacggcggttgaatttgtcaagcgcaagggcgtggat
atcaaccttgctcatattccgctcgatgacggagaaacctatgcaattttgtcccgcggg
gaaacagtcggcgtgtttcaggtggaaagtgcgggcatgcgcaaggcgctgctggggatg
cggccggacaggatcgaggatattatcgcgctggtggcgttgtaccgcccggggccgatg
gaaaacatcccgacctataatgcgcgcaagcatggtgaggaagaaatcgcctccattcat
cccaaaatcgactatctggtgaaggaaacgcagggcgttatcgtttatcaggagcaggtg
atgcagattgcccaggtgctttcaggctattcattgggagaagcggatttactgcgccgc
gccatgggcaagaaaatccgggcggaaatggatcagcagcgcgcccgttttgttgacggc
gcggtggagggcgggcttggcaaggaacaggccaatacgatttttgatttgctggcaaaa
tttgccgattacggttttaacaaatcccatgcggcggcttatgccattgtttcgtaccag
acggcttatctcaaggcgcaccatccggtagagtttctggcggcgtccatgacctatgat
atgtcaaacaccgacaagctcaatgattttcgccgcgaggccgagcggttgggtattgaa
gttgtcgcgccgtctgtccagacatctcaccgggtttttgaagtgggcgagaatacaatt
tattattcactggccgcgatcaagggggtgggtgaaccggcggttgaccatattgttgaa
tgccgtggcgacaagccttttgccaatctggaagacttttgcgagcggaccgacccgcgt
attgtcaaccggcgggtgctggaaagtctggtcaatgccggggcgcttgattgtttcggc
attcgccgggaagtgctgattgccggagttgatacgatcatcgcccgttcgcaacgcctg
tcggaagatcaaaatagcggccagattgatattttcgggatggtgagcggagtgagcgag
ccgctcatgctgccgcaggcagagccatggcttggcggagagaagctgcaccgcgagttt
caggccgtagggttttacctttccgcccatccgcttgatgaatataagaacctgcttgga
aaaatgcgtgtgcaggaatgggcgacttttgccggcgctgtgcgccggggggcaagtgcc
gggcggctggcgggaacagtgaacgccaagcagatccgcaaaacccgttcaggcaacaag
atggggattgtgcagttttccgatgcaaccggtcagtatgaagctgttttgttttcagaa
ggtctggcgcaatatggtgatatgctggaggcaggacaatccgttgtcatcaccgttgca
gctgaagatcggcctgagggggtgagcctgcgggtgcagacggtgcaatcgctggaaggc
gaggcggggcgggtgcaaaaagccatgcggctttatgtccgttcggcagatacggtcagg
caaatcgccggacagcttaaaaatgaaggtgatggcgcagtaagccttattgtcatcaag
gatcagggtgcgtcagagattgaaattgctctgcctaaacgttataaactcagcccaagt
cttgctgcagcattaaaaacggtgtctgaagtcattgatgtggaattgatttaa
DBGET
integrated database retrieval system
