Thermomonas sp. HDW16: G7079_08660
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Entry
G7079_08660 CDS
T06498
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
theh
Thermomonas sp. HDW16
Pathway
theh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
theh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G7079_08660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
theh03019
]
G7079_08660
03009 Ribosome biogenesis [BR:
theh03009
]
G7079_08660
Enzymes [BR:
theh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G7079_08660
Messenger RNA biogenesis [BR:
theh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G7079_08660
Ribosome biogenesis [BR:
theh03009
]
Prokaryotic type
rRNA helicases
G7079_08660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_30
AAA_19
TetR_C_6
Flavi_DEAD
UvrA_inter
HEM4
DUF6702
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QIL20797
UniProt:
A0A6G7ZVG4
LinkDB
All DBs
Position
1865081..1866877
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AA seq
598 aa
AA seq
DB search
MSADTPTTTFADLGLPDSLLAALREVGYETPSPIQAATIPALLAGRDMIGQAQTGTGKTA
AFALPALARLEAAANKPQVLVLAPTRELAIQVAEAFQKYAHHIPGFHVLPIYGGQSYQPQ
LSALKRGVHVVVGTPGRVIDHLERGSLDLSQLRMLVLDEADEMLRMGFIDDVEAVLKKTP
ETRQVALFSATMPAQIKRIAQTYLKDPVEIAIKSQTSTAENIRQRFWMVSGVNKLDALTR
IMEAEPFDAMIIFARTKLGTDELAEKLAARGFSAAAINGDVEQKTRERTIQRLKDGQIDV
LVATDVAARGLDVDRISHVLNYDIPYDTESYVHRIGRTGRAGRKGEAILFVAPRERGMLG
AIERATRQKIEQMNLPSVDAVNERRVAKFLDKIEGALASDDLSVFRDLVERYEREKNVPA
VEIAAALAALVQGKTPLLLAKPAAPERTFEVCERPERAERPQREPRERTPRDPSAPEVGM
QTFRIDVGYQHGVQPGNIVGAIANEADLEARFIGRIDIRDDFTLVDLPEGMPPELLQHMQ
TVRVASRPLRMRPAEAADIDAPKAKRSFGPPRGDRPGGPRKPGGFKKPGGFKPRGPRS
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgacaccccaaccaccacctttgccgatctcggcctgccggattccctgctg
gcggccctgcgcgaagtgggctacgaaacccccagcccgatccaggccgccaccatcccc
gccctgctggccggccgcgacatgatcggccaggcgcagaccggcaccggcaagaccgct
gcgttcgccctgcccgcgctggcgcggctggaagcggccgccaacaagccgcaggtgctg
gtgctggcacccacccgcgaactggcgatccaggtcgccgaggccttccagaagtacgcg
caccacatccccggcttccacgtgctgccgatctacggcggccagagctaccaaccgcag
ttgagcgcgttgaagcgcggcgtgcatgtggtggtgggtacgcccggccgcgtcatcgac
cacctcgaacgcggctcgctcgacctctcccaactgcgcatgctggtgctggacgaagcc
gacgaaatgctgcggatgggcttcatcgacgatgtcgaagccgtcctcaagaaaaccccg
gaaacccgccaggtcgcgctgttctcggcgacgatgccggcgcagatcaagcgcatcgcc
cagacctatctgaaggatccggtggagatcgcgatcaagtcgcagacctccaccgccgag
aacatccgtcagcgcttctggatggtcagcggcgtcaacaaactggatgcgctgacccgg
atcatggaagccgagccgttcgacgcgatgatcatcttcgcgcgcaccaagctgggcacc
gatgagctcgccgaaaaactcgctgcgcgcggcttcagcgcggcggcgatcaatggcgac
gtggagcagaagacccgcgagcgcaccatccagcggctgaaggacggccagatcgacgtg
ctggtggccaccgacgtggccgcgcgcgggctggatgtggatcgcatcagccacgtgctg
aactacgacatcccgtacgacaccgaaagctacgtgcaccgcatcggccgcactggccgc
gcgggccgcaagggcgaggcgatcctgttcgtggccccgcgcgagcgcggcatgctgggc
gcgatcgaacgcgccacccggcagaagatcgagcagatgaacctgcccagcgtggacgcc
gtcaacgagcgccgcgtggccaagttcctggacaagatcgaaggcgcgttggccagcgac
gatctctcggtgttccgcgatctggtggaacgttacgagcgcgaaaagaacgtgccggcg
gtggaaatcgccgctgccctcgccgcgctggtacagggcaagaccccgctgctgctggca
aagccggcggcgccggaacgcaccttcgaggtgtgcgagcgcccggaacgcgccgagcgt
ccgcagcgcgaaccccgcgagcgcaccccgcgcgacccgagcgcaccggaagtcggcatg
cagaccttccgcatcgatgtcggttaccagcacggcgtgcaaccgggcaacatcgtcggc
gccatcgccaacgaagctgacctcgaagcgcgcttcatcggccgtatcgacatccgcgac
gatttcaccctggtcgacctgcccgaaggcatgccgccggagctgctgcagcacatgcag
accgtgcgcgtggccagccggccgctgcgcatgcgcccggccgaagccgccgatatcgac
gcacccaaggccaagcgcagcttcggcccgccgcgtggcgatcgccccggcggcccgcgc
aagccaggcgggttcaagaagcccggtggtttcaaaccacgcggtccgcgctcctga
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