KEGG   Thermococcus argininiproducens: K1720_07540
Entry
K1720_07540       CDS       T08316                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
thei  Thermococcus argininiproducens
Pathway
thei03030  DNA replication
thei03410  Base excision repair
thei03420  Nucleotide excision repair
thei03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:thei00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    K1720_07540
   03410 Base excision repair
    K1720_07540
   03420 Nucleotide excision repair
    K1720_07540
   03430 Mismatch repair
    K1720_07540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:thei03032]
    K1720_07540
   03400 DNA repair and recombination proteins [BR:thei03400]
    K1720_07540
Enzymes [BR:thei01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     K1720_07540
    6.5.1.6  DNA ligase (ATP or NAD+)
     K1720_07540
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     K1720_07540
DNA replication proteins [BR:thei03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    K1720_07540
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     K1720_07540
DNA repair and recombination proteins [BR:thei03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     K1720_07540
   NER (nucleotide excision repair)
    Other NER factors
     K1720_07540
   MMR (mismatch excision repair)
    Other MMR factors
     K1720_07540
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase TPR_1 Sel1
Other DBs
NCBI-ProteinID: USG99379
UniProt: A0A9E7SC02
LinkDB
Position
1402300..1403982
AA seq 560 aa
MLYKELAELYKRLEKTTLKTLKTKFVSDFLKSVTKPELLEIVPYMILGKVFPDWDERELG
VGEKLLIKAVSMATGIKSEEMENSIKDTGDLGESIALALSKRKQKSFFSQPLTLERVYNT
LVKVAEASGAGSQDRKLKYLANLFMDASPEEGKYLARTILGTMRTGVAEGLLRDALADAF
KVKVELVERAYMLTSDFGFVAKVAKLEGNEGLAKVEIQVGKPIRPMLAQMAANVREALIE
MGGEAEFEIKYDGARVQVHKDGDNVVIYSRRLENVTKSIPEVVERVKKTLKARKAIVEGE
LVAVGEGGRPKPFQYVLRRFRRKYNIEEMIEKIPLELNLFDVLYVDGKNMIDVQFMERRK
VLEKIVNSNEWIKPAENLITKNPEEAEEFYHKALELGHEGLMAKRLDSVYEPGNRGKKWL
KLKPTMENLDLVILGAEWGEGRRSGVLSSFLLGAYDPVRGDFVPVGKVGSGFTDEDLIEF
TKMLKPLIKKEHGKEVELEPKVVIEVAYQEIQKSPKYESGFALRFPRYISLREDKGPEDA
DTIQRVAELYQFQERMKGGK
NT seq 1683 nt   +upstreamnt  +downstreamnt
atgctttacaaagagttggctgagttatataaaagacttgaaaaaactacacttaaaact
ctcaaaacaaagtttgtgtctgattttctaaaatctgttacaaagcctgagcttcttgag
atagtcccttatatgatccttggaaaagtctttccggattgggatgagagagagctaggc
gttggtgagaagcttttaataaaagccgtgtctatggcaacagggattaagagtgaggag
atggagaattccataaaagacaccggagatcttggggagagtattgccttggccttaagt
aaaagaaaacaaaaaagcttcttttctcagccccttactttggagagagtctacaataca
cttgtcaaagttgcagaagcctcaggagcaggaagtcaagaccgaaagctcaagtatctt
gctaatctctttatggatgcctctccagaggaaggaaaatatcttgcgagaaccattctt
gggacaatgagaactggagttgcggaaggtcttttgagagatgctctggctgatgcgttt
aaagtaaaagttgaacttgtggaaagggcgtacatgcttacgagtgattttggatttgtg
gcaaaagttgcaaagcttgagggcaacgaagggttagctaaagtagaaatacaagtaggt
aagcccataaggcccatgctggcccaaatggctgcaaatgttagagaggccttaattgag
atgggtggtgaggctgagtttgaaatcaaatatgatggggctagagtgcaggttcacaaa
gacggagataatgtagtcatctattcaagacgtcttgaaaacgttaccaaatcgattccg
gaagttgttgaaagagtaaaaaagactctgaaagctaggaaggctatagtagaaggagaa
cttgttgccgttggagaaggagggcggcccaaacccttccagtatgtgcttagaagattc
aggagaaagtacaatatagaagaaatgatagagaaaatcccacttgaacttaacctcttt
gacgtcctctatgtagatggcaaaaacatgatagatgtccaatttatggaacgtagaaag
gttcttgagaagattgtaaattcaaatgaatggataaaacccgcagagaatctcataaca
aagaatccagaagaggcagaagagttttatcacaaagccttagagttgggccatgaaggc
cttatggccaagagactagactcggtttatgaacctggtaacaggggcaagaaatggctt
aagctcaagcctacgatggaaaacttggatctggttatacttggagcagaatggggagag
ggtaggaggagtggagtactcagttcgttccttcttggagcttatgatcccgtaaggggc
gactttgtaccagtgggtaaggtaggaagtgggttcactgatgaagatttaatagaattt
acgaaaatgcttaagccccttataaagaaagaacatggcaaggaagtggaattggaacct
aaggtagttatagaagtagcctatcaagagatacagaagagtcctaaatacgaaagcggt
tttgcgcttaggttcccacgatatatttctctgagagaagataaagggccagaagatgca
gatactatccagagagtagctgagttatatcagttccaagagaggatgaaaggaggtaaa
tga

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