Infirmifilum lucidum: IG193_03210
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Entry
IG193_03210 CDS
T06910
Name
(GenBank) type IA DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
thel
Infirmifilum lucidum
Brite
KEGG Orthology (KO) [BR:
thel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thel03032
]
IG193_03210
03400 DNA repair and recombination proteins [BR:
thel03400
]
IG193_03210
Enzymes [BR:
thel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
IG193_03210
DNA replication proteins [BR:
thel03032
]
Prokaryotic type
DNA Topoisomerases
IG193_03210
DNA repair and recombination proteins [BR:
thel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IG193_03210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QOJ79484
UniProt:
A0A7L9FKL1
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Position
complement(577873..579774)
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AA seq
633 aa
AA seq
DB search
MLYDAVIVAEKPAVALAFAKFLGEGKYRRVFVEGVPSYVFHFRGGDYLSIGLTGHILDFD
FPREYNEWNAVDPKKLFFIDPILVVREGAYKYVKALKALALKTSHAILALDADVEGEGIA
FEVIRIMSQANPNLEFKRAWFSAVTKWDILNAMQNLREPNELWAKKVFARMVVDLTVGAS
FTRLLTLAVQRQKSMLPLGKFLSYGPCQTPVLYLVVKRELEREQFKKKKYYVIVAELEAD
GHVITASANLGEDKEKAASALALAKREEFATVVLSEASIVEVSPPVPLNTIDFESRASAF
LNIRPKEALAIAEKLYQYGYISYPRTETTIYPPTLNLSQLASMFTSWEDIGWYVTKILQK
GLTPTRGREDDKAHPPIHPTKVASRAGLLRAMGEKAWRVYELVVRHFLATLSEKAQVEKQ
RVVARLGGVELSAEGRRVVYPGFYYVYYYARPEEKPLPYLVEGDRLRVRSLRLEERSTQP
PPYLSESELLALMKRYGIGTDATMQDHIHTNIERKYFVVRERRCIPTPLGKTLILSLLEV
EPRLVLPEIRGKMESLLAKVASGEREASEVVAEIKETFLEYYENVAAKIDAISQKLVPVI
AEVYRPDGNQQAGLFPRNRGLRGGRKKSKKAKE
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
gtgctttacgatgctgtcattgttgcggagaaacccgccgtggcactagcctttgccaag
ttcttaggagaaggaaagtacaggagagtgtttgttgaaggggtgccctcctacgtcttc
cacttcaggggcggggactacctgtccatagggcttacaggtcatatactggattttgac
ttcccgagagagtacaatgagtggaacgctgtagaccccaagaaactattcttcatagac
cctatattggtcgtcagggagggggcctataagtacgtcaaggccttgaaggcactggca
ctaaagacttcgcacgccatcttggcccttgacgctgacgttgaaggagagggcatagcg
ttcgaggtaattaggattatgagtcaggctaaccctaacctggagtttaaacgtgcctgg
ttctcggctgtgactaagtgggacatacttaatgctatgcagaacctgcgcgagccgaac
gaattgtgggctaagaaagtcttcgctaggatggttgtagacttgaccgtcggcgcgtcc
ttcacgaggctactgacgctggccgttcagaggcaaaagtccatgctacctctaggtaag
ttcctgagctacggcccctgtcagaccccagtactctacctcgtcgtaaagcgggaactt
gagcgcgagcagttcaaaaagaagaagtactatgtcatcgtcgcggagctagaggctgat
ggccacgtaatcaccgcgtcagcgaacctcggcgaggacaaggagaaggccgcgtctgct
ctcgctttagctaaacgtgaggagtttgcaaccgttgtgttatccgaggctagtatagtc
gaggttagccctccagtaccgcttaacacgatagactttgagagcagggcgtcggcgttc
ctcaacattaggccgaaggaggctctagcaatagcggagaagctctaccagtacggctac
atctcgtacccgagaaccgagacaacgatataccctccaacgcttaacctatcccaacta
gcgtcaatgttcacttcgtgggaggacatcggctggtacgtcacaaaaatcctccagaag
gggctcacgccgaccaggggacgcgaggacgacaaagcacaccccccaatccacccgact
aaagtggcatcaagggccggtctgctgagagctatgggcgaaaaagcctggcgtgtgtac
gagctagtcgtgcgacacttcctggcgactctgagcgagaaagcgcaggtcgagaagcag
agagtcgttgcaaggctggggggcgtcgagctctcagcggagggcaggagagtcgtgtat
ccgggtttctactatgtctactactacgctaggcccgaggagaagccactgccgtatctg
gttgaaggtgataggcttagagttaggagtctaaggctggaagagaggtctacgcagcct
cccccctaccttagcgagagcgagctactggcactaatgaagaggtacggcataggtaca
gacgcgacaatgcaggatcacatacacacgaacattgaaaggaagtacttcgtagtccgc
gagaggcgttgcataccgacgccgctcggaaagactctcatactatcactgctggaggtg
gagccccgcctcgttcttccggagatcagggggaagatggagtctttgcttgcgaaagta
gcgtcgggcgagagagaggccagcgaagttgtggccgagattaaggagacttttctagaa
tactacgagaatgtagcggcgaagatcgacgctatatcgcagaagctcgtgccggttatt
gccgaggtctacaggccggacgggaaccagcaggcagggcttttccctcgaaacagaggt
ctacgtggaggccggaaaaagagtaaaaaggccaaagaataa
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