KEGG   Infirmifilum lucidum: IG193_03790
Entry
IG193_03790       CDS       T06910                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
thel  Infirmifilum lucidum
Pathway
thel03030  DNA replication
thel03410  Base excision repair
thel03420  Nucleotide excision repair
thel03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:thel00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    IG193_03790
   03410 Base excision repair
    IG193_03790
   03420 Nucleotide excision repair
    IG193_03790
   03430 Mismatch repair
    IG193_03790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:thel03032]
    IG193_03790
   03400 DNA repair and recombination proteins [BR:thel03400]
    IG193_03790
Enzymes [BR:thel01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     IG193_03790
    6.5.1.6  DNA ligase (ATP or NAD+)
     IG193_03790
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     IG193_03790
DNA replication proteins [BR:thel03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    IG193_03790
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     IG193_03790
DNA repair and recombination proteins [BR:thel03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     IG193_03790
   NER (nucleotide excision repair)
    Other NER factors
     IG193_03790
   MMR (mismatch excision repair)
    Other MMR factors
     IG193_03790
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase DNA_ligase_OB_2
Other DBs
NCBI-ProteinID: QOJ79590
UniProt: A0A7L9FIH0
LinkDB
Position
complement(685296..687101)
AA seq 601 aa
MSQSDLPYSVLVEFYEKIESTSSRLAMTDYLVALFKKTPVEVLDKVVYLTQGQLRPDYEG
VELGVAEKLTLRAISKATGVPLKTVEELYKKVGDPGLVAEQLLSRPKQATGLLGFIGQEG
LKHELTISQVYSSLMKIALATGEGSQDTKVNTLAGLLSDAKPKEARYIVRTVTGRLRLGI
ADMTILDALAVAFTGSKAAREVVERAYTKRPDLGFIAKELASNGLEAIKAIKIEVGVPVL
PMLAERLSDPAEILEKLGGQCLAEYKYDGERVQAHKKDERVWLFSRRLENITHHYPDVVN
FVSMLKAEEAVVEGEIVAYNSDTGEMLPFQELMHRRRKYDVDKAMKEYPVRVYLFDIIYL
DGQELIEKPLPERRKILESIVPAGSEDILLSKARLVDNAKDLLLFFEEAISEGCEGVMCK
SVSGQSVYQMGARGWLWIKFKRDYRMEMTDTVDLVVVGAFHGRGKRAGTYGALLMAAYDP
QSDTFKTVCKVGTGFTDEDLANLPKLLEPYRIPHRHPRVVSRIEADVWFVPAVVLEIIGA
EITLSPLHTCALGKVEPESGLAIRFPRFTGRYRFDKKPEQATTEAELMEMYKSQRKTALQ
Q
NT seq 1806 nt   +upstreamnt  +downstreamnt
atgtctcaaagtgatctgccgtacagcgttctagtagagttctacgagaagatcgagagc
acgtccagcaggcttgccatgacagactacctcgtcgccctgttcaagaagacgcccgta
gaggtgctggacaaggtggtatacttgacccaggggcagttgaggcccgactacgagggt
gtcgagctgggcgttgccgagaagctcacgctcagggcaatatctaaggctacaggtgtc
ccgctaaagacagttgaagaactctacaagaaggtcggcgacccaggtctcgttgctgag
cagttgctttccaggccgaagcaggccaccggcctgctaggcttcatagggcaggagggc
cttaagcacgaactcacgatctcccaggtctacagctccctcatgaagatagccctagct
acaggcgagggcagccaggacactaaggtaaacaccctcgcgggcctgctatccgacgct
aaacccaaggaggccaggtacatcgttaggacggttacaggtaggctcaggctgggcata
gccgacatgactatactagacgccctagccgtggccttcacggggtcaaaggccgctaga
gaggtggtagaaagagcctacacgaagaggccggatctaggcttcatcgcgaaggagctg
gcttcaaacgggctggaggctattaaagcgataaagatcgaggtcggcgtcccagtactg
cccatgcttgccgagcggctcagcgacccagcagagatactcgagaagctggggggccaa
tgcctcgcagagtacaagtacgacggcgagagagtgcaggcgcacaagaaggacgagaga
gtctggctctttagcaggaggctggagaacataacacaccactaccccgacgtcgtgaac
ttcgtgtctatgcttaaagcagaggaggctgtcgtagagggcgagattgtagcatacaac
tcagacaccggggaaatgctccccttccaggagttaatgcaccggaggaggaagtacgac
gtggacaaagcgatgaaggagtaccccgtcagagtgtacctcttcgacataatctacctc
gacggccaggagctcatcgagaagccgctcccggagcgcaggaaaatactggagtccata
gtgcccgcgggcagcgaggacatattgctctccaaggcgaggctcgtcgacaacgcgaag
gatctcctcttgttcttcgaggaggctataagcgagggctgcgagggcgtgatgtgcaag
tctgtatcaggccagagcgtgtaccagatgggcgcgaggggctggctttggataaagttc
aaacgcgactacagaatggagatgacggacaccgtagacctcgtagtggtcggggctttc
cacggcaggggcaagagggctgggacgtatggcgctctccttatggccgcctacgacccc
cagagcgacactttcaagaccgtctgtaaagtcggtacgggcttcaccgacgaggatcta
gccaacctgcctaagctcctcgagccataccgcataccgcaccgccaccccagggttgtc
tccaggatagaagcggacgtctggtttgtaccagctgttgttctcgagattataggagcc
gagatcactctcagcccactccacacctgtgccctcggcaaagtagagcccgagtcaggc
ctggcaattaggttcccgaggtttacgggcaggtataggttcgacaagaagccggagcag
gcgacgacggaggctgagctcatggagatgtacaagtcgcagcgcaagacggctctccaa
cagtag

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