KEGG   Thermococcus aciditolerans: FPV09_09490
Entry
FPV09_09490       CDS       T07677                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
them  Thermococcus aciditolerans
Pathway
them03030  DNA replication
them03410  Base excision repair
them03420  Nucleotide excision repair
them03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:them00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FPV09_09490
   03410 Base excision repair
    FPV09_09490
   03420 Nucleotide excision repair
    FPV09_09490
   03430 Mismatch repair
    FPV09_09490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:them03032]
    FPV09_09490
   03400 DNA repair and recombination proteins [BR:them03400]
    FPV09_09490
Enzymes [BR:them01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     FPV09_09490
    6.5.1.6  DNA ligase (ATP or NAD+)
     FPV09_09490
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     FPV09_09490
DNA replication proteins [BR:them03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    FPV09_09490
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     FPV09_09490
DNA repair and recombination proteins [BR:them03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     FPV09_09490
   NER (nucleotide excision repair)
    Other NER factors
     FPV09_09490
   MMR (mismatch excision repair)
    Other MMR factors
     FPV09_09490
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase DNA_ligase_OB_2
Other DBs
NCBI-ProteinID: QEK15953
UniProt: A0A5C0SNH8
LinkDB
Position
1728136..1729815
AA seq 559 aa
MKYAELADLYRRLEKTTLKTLKTRFVSDFLKKASDELLEIIPYLILGKVFPDWDERELGV
GEKLLIKAVSMATGVSEREIEDSVRDTGDLGESVALALKKKRQKSFFSQPLTIKRVYDTF
VKIAEASGQGSQDRKLKYLANLFMDAGPEEGKYLARTVLGTMRTGVAEGLMRDAIASAFG
VKAELVERAYMLTSDFGYVARVAKLEGNDGLSKVRIQVGKPIRPMLAQNAANVKEALTEM
GGKAAFEIKYDGARVQVHKDGGRVVIYSRRLENVTKSIPEVVDAVLESVKAEEAIVEGEL
VAVGEGGKPRPFQYVLRRFRRKYNIEEMIEKIPLELNLFDVLYVDGEGLIDTPFSERRER
LEGIISPGERIRLAEQLVTDNADEAEAFYQRALELGHEGLMAKRLDSVYEPGNRGKKWLK
IKPTMEDLDLVIIGAEWGEGRRAHLLGSFLVAAFDPHSGEFVPVGKVGSGFTDEDLAEFT
KMLKPLIVREEGKYVEIEPKVVIQVTYQEIQKSPKYESGFALRFPRYVALREDKSPEEVD
TIERIAQLYEFQERFKAKR
NT seq 1680 nt   +upstreamnt  +downstreamnt
atgaaatacgccgaactggccgacctttacaggcgcttggaaaaaacgaccctcaagacc
ctcaagaccagattcgtctctgattttctcaagaaggcatccgatgagctcctcgagata
atcccctacctcatcctcggaaaggtcttcccggactgggatgagagagagcttggagtc
ggtgagaagctcctcataaaggccgtttccatggcaacgggagtttccgagcgagaaatc
gaggactccgtgagagacaccggcgacctcggtgagagtgttgctttagccctgaagaag
aaaagacagaagagcttcttctcccagccgctgaccataaagcgcgtttatgacacattc
gtgaagatagccgaggccagtgggcaggggagtcaggacaggaagctgaagtacctcgcc
aacctcttcatggacgccggaccggaggagggcaagtacctcgccaggactgtccttgga
accatgagaaccggcgttgcagagggactcatgagggacgccatagcgagcgcctttggc
gtcaaggccgagctcgtcgagagggcctacatgctcacgagcgacttcggatacgtcgcg
agggtggccaagcttgagggcaacgacggcctctcaaaggtcagaatccaggtgggcaag
cccataaggccgatgctcgcccagaacgcggccaacgtgaaggaagcgctgacggagatg
ggcggaaaggcggcgttcgagataaaatacgatggggcacgcgttcaggttcacaaggac
ggcggtagggttgttatatactcccgcaggctggagaacgtgacgaagtccattccggag
gttgttgacgccgtcctggagagcgtaaaagctgaagaggccatcgtggagggcgagctc
gtcgccgtaggtgaaggtggaaagcccagacccttccagtacgtgctgaggaggttcagg
cggaagtacaacatcgaggagatgatagagaagattccccttgagctgaacctctttgat
gtcctctacgttgacggtgaggggctgatagacacccccttctccgagcgcagggagaga
cttgaagggataatctccccgggtgagcggataaggctggcggagcagctcgttacagat
aacgccgatgaggcagaggccttttaccagcgcgcccttgagctcggccacgagggtctg
atggcaaagcgcctggattcggtttacgagcccggaaacaggggcaagaagtggctcaag
ataaagcccactatggaggacctcgacctcgtcataatcggcgccgaatggggcgaggga
aggcgcgcacacctcctcggctccttcctggttgcggcattcgacccgcacagcggcgag
ttcgtcccggtcggaaaggtcggcagtggcttcaccgacgaggacttggccgagttcacc
aagatgctcaagcccctcatagtccgcgaggagggcaagtacgtcgagatagagccgaag
gttgttatccaggtcacctaccaggagatacagaaaagcccgaagtacgagagcggcttt
gccctccgcttcccgcgctacgtcgctttgagggaggacaagagtccggaggaagtggac
acaatcgagcgcatagcccagctctacgagttccaggagaggttcaaggcgaagaggtga

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