Thermodesulfobacterium sp. TA1: F1847_06255
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Entry
F1847_06255 CDS
T06202
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
thet
Thermodesulfobacterium sp. TA1
Pathway
thet00550
Peptidoglycan biosynthesis
thet01100
Metabolic pathways
thet01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
thet00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
F1847_06255 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
F1847_06255 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thet01011
]
F1847_06255 (mrdA)
Enzymes [BR:
thet01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
F1847_06255 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
thet01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
F1847_06255 (mrdA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QER42364
UniProt:
A0A5P1V0I8
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Position
complement(1220740..1222659)
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AA seq
639 aa
AA seq
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MKRRAFLIQDFAKAKQKILNSEFWDKRLFWAKVLLIVILIILWGRFFYLQVIKHSYYAKK
AKSRSVVSYVIKAPRGNIITADGVVVATNKAVFNLYIDVEAVKDKEDEVLYKLSKLLQED
FGSLKEQFYLLKKTSISRVLLKSDLRWDEVAKVMVRLYYLPGVSVEVESERYYPYGEAYF
HLIGYVSKITREEYLKLKDKGYHVEDLIGRKGLERVFETELKGKNGVVEIERDAYGRLGR
VISRTEPVAGNDLFLTIDHNLQLTAYELLKGKRGAIIALSPLDGGILAMVSSPSIDPQKF
ISGFSKEEWQALSSAKESPFLNKTLKGYPPGSTFKVITALTALRKGTITNTGQSVFCPGY
FNFGSRTFKCWEHRGHGTVGLIKAIAVSCDVYFYTLGTKLDVDDIAKISREFGLGQKALG
WVEEDLGLVPDREWKKKRLKQDWFPGETVVLSIGQGYLLVSPIQLARLYMAIANGGYLYR
PYVVKAIQRIDGSKIEFQSVLEKKIDINPQHLDWIRQGLIEVVKAGTAKSAALPGIMVAG
KTGTAQVVSSKAKTKHLENHAWFVSYAGKDTPEIVSTVFVEHGGHGGGVAAPLARELYKV
FFKISTPPTQTSEEGEGLPELEEGLENPYIEGENASEGR
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaagggcttttttaatccaagattttgctaaggctaaacaaaagattttaaat
tctgagttctgggataaaagacttttttgggctaaagttttgttgatcgttattttgatc
attctctgggggagatttttttatttacaagtcataaaacattcatactatgctaaaaaa
gctaaatctcgctcagtggttagttatgtaataaaagcccctcgaggaaatataattact
gcagatggggtggtggtagctactaataaagcggtttttaatctttatatagatgttgaa
gcggttaaagataaagaagatgaggttttatataaattaagcaaacttttgcaggaggat
tttggtagtttaaaagagcaattttatctgcttaaaaaaacttccataagtcgagtgctt
ttaaagtctgatttgcgctgggatgaagtagctaaggttatggtaaggctttactattta
cctggggtaagcgtagaggtagagtctgaaagatattatccttatggagaagcttatttc
catttgataggttatgtttctaaaattactcgagaagaatacctcaaacttaaagacaaa
ggatatcatgtagaagacctaataggaagaaagggattagaaagggtttttgaaacagaa
cttaagggtaaaaacggagtggtggagatagagagagacgcctacggtagattaggtaga
gtaatttcacgaacagagcctgtagcaggaaacgacctttttttaaccatagaccataat
cttcagcttacagcttatgaattattgaaaggtaaaagaggggctattatcgccctttct
cctttagacggtggtattttagctatggttagttctccttctatagaccctcaaaagttt
atttcaggtttttctaaagaggaatggcaggccctttcttctgctaaggaaagccctttt
ttgaataagactttaaagggttatcctccaggatcaacctttaaagttattactgcttta
acagctttaagaaaggggactataaccaatacgggacaaagtgttttttgtcctggatat
tttaattttggtagtagaacctttaaatgttgggaacaccgaggacatggcacagtggga
ttgataaaggctatagcggtgtcttgcgatgtatatttttataccttagggactaagctc
gatgtagacgacatagctaaaatttcaagagagtttggtttagggcaaaaagctttaggt
tgggtagaggaggacttagggcttgttcctgatagagaatggaaaaagaagagattaaaa
caggattggttcccaggggaaacggtagtcctttctataggacaagggtatttattggtg
tcacctatccaattagccaggctttatatggccatagcaaacggtggttatttataccgt
ccttatgtagtaaaagctattcaaaggatagacggaagcaagatagaatttcagtcagtt
ttagaaaaaaagatagatataaaccctcagcatttagactggataagacaaggacttatc
gaagtggttaaagctggaacggctaagtctgctgctcttccaggaataatggttgcaggc
aagacaggaaccgctcaagtggtttcttctaaagcaaaaactaaacatcttgaaaaccat
gcctggtttgtaagttatgcaggaaaggataccccagagatagttagcacggtttttgta
gaacatggaggccatggaggaggtgtagctgctccccttgcgagagagctttataaagtg
ttttttaaaatttctacccctcccactcagacctcagaagaaggagaagggttaccagaa
ttagaagagggattagagaacccctatatagagggagaaaatgcaagtgaaggaagataa
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