Thermodesulfomicrobium sp. WS: TDMWS_17410
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Entry
TDMWS_17410 CDS
T08730
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
thew
Thermodesulfomicrobium sp. WS
Pathway
thew00521
Streptomycin biosynthesis
thew00523
Polyketide sugar unit biosynthesis
thew00541
O-Antigen nucleotide sugar biosynthesis
thew01100
Metabolic pathways
thew01110
Biosynthesis of secondary metabolites
thew01250
Biosynthesis of nucleotide sugars
Module
thew_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
thew00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
TDMWS_17410 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
TDMWS_17410 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
TDMWS_17410 (rfbC)
Enzymes [BR:
thew01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
TDMWS_17410 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
NOPS
Motif
Other DBs
NCBI-ProteinID:
BDV01656
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Position
complement(1862907..1863473)
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AA seq
188 aa
AA seq
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METRTTSIPGVVLVRPRRFEDERGAFCETYREDVWSAAGVAARFVQDNTAWSLRAGTVRG
LHFQVPPHAQAKLVRVVRGRIFDVVVDLREDSPTFRRWESFELDAASRWQLFVPKGLAHG
YMTMEDDTEVAYKVDAYYAPNAEAGIRWDDPDLAIPWPSFAPIVSQKDRMLPLLVERELW
WDTEVWEG
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggagacacggacgacgtccattcccggggtagtgctggtgcggccgcggcgctttgag
gacgagcggggggccttttgcgagacctatcgcgaagacgtatggagtgctgcaggggtt
gccgcccgtttcgtgcaggacaacaccgcctggtcgcttcgcgccggcacggtgcgggga
ctgcattttcaggtcccgccccatgcccaggccaagctggtgcgggtagtgcgggggcga
atcttcgacgtggtggtggatctgcgtgaggattcgccgacctttcggcgctgggaatct
tttgagctcgatgccgcatcccgttggcagctctttgtgcccaaaggcttggcccacggc
tacatgaccatggaagacgacaccgaggtggcctacaaggtggacgcctactacgctccc
aacgccgaggccggtatccgctgggatgatccggacctggccatcccctggccatcgttt
gcccccatcgtctcgcaaaaagaccgcatgcttcccctgttggtggaaagggaactctgg
tgggatacggaggtatgggaaggataa
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