Thiomicrorhabdus sediminis: FE785_02350
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Entry
FE785_02350 CDS
T05983
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
thig
Thiomicrorhabdus sediminis
Pathway
thig00521
Streptomycin biosynthesis
thig00523
Polyketide sugar unit biosynthesis
thig00541
O-Antigen nucleotide sugar biosynthesis
thig01100
Metabolic pathways
thig01110
Biosynthesis of secondary metabolites
thig01250
Biosynthesis of nucleotide sugars
Module
thig_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
FE785_02350 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FE785_02350 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FE785_02350 (rfbC)
Enzymes [BR:
thig01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
FE785_02350 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
DUF6370
Motif
Other DBs
NCBI-ProteinID:
QCU89557
UniProt:
A0A4P9K5M6
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All DBs
Position
527250..527813
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AA seq
187 aa
AA seq
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MNFIPQSIPDVILVQPKVWGDDRGYFVETFRQDKFEEAIGYKVDFCQDNESKSIKGVLRG
LHYQLPPFAQSKLVRVIDGRVLDVAVDIRMGSPTFGQHVAVELSAENKQQLFIPQGFAHG
FVVLSDSAIFAYKVDSYYSPECDRGLAFNDPTLQIDWQLSADELKLSEKDKKQPNLSNLD
GGFEYGK
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcattcctcaatctattcctgacgtgatcttagtgcaacccaaagtttggggc
gatgatcgaggctattttgttgaaacgtttcgtcaggataagtttgaagaagcgattggc
tataaagtggacttttgtcaagacaacgaatccaaatcaattaaaggggtgctacgcgga
ttgcattatcaattaccaccttttgcacaaagcaaacttgtacgggttattgacggcaga
gtgctagatgtggctgttgatatcagaatgggtagtccgacattcgggcaacatgtcgcc
gtagagcttagtgcggaaaataaacaacagttgtttattcctcaaggttttgcccatggt
tttgtggtgctgagtgattccgctatttttgcctataaagttgatagctactactcacct
gagtgcgatcgaggtttagcgttcaatgaccccacattacaaattgattggcaattatca
gcagacgaattgaagctttctgaaaaagacaaaaaacaaccgaatctgtccaatttagat
ggcggctttgaatatggcaaataa
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