Thiomicrorhabdus sediminis: FE785_07860
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Entry
FE785_07860 CDS
T05983
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
thig
Thiomicrorhabdus sediminis
Pathway
thig01501
beta-Lactam resistance
thig01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FE785_07860
01503 Cationic antimicrobial peptide (CAMP) resistance
FE785_07860
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thig02000
]
FE785_07860
01504 Antimicrobial resistance genes [BR:
thig01504
]
FE785_07860
Transporters [BR:
thig02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
FE785_07860
Antimicrobial resistance genes [BR:
thig01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FE785_07860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
MMPL
Patched
Motif
Other DBs
NCBI-ProteinID:
QCU90553
UniProt:
A0A4V1HHX6
LinkDB
All DBs
Position
complement(1721985..1725131)
Genome browser
AA seq
1048 aa
AA seq
DB search
MLSKFFIDRPVMASVFSLIIVIAGFLGMKSVPIAEYPQIVPPQVQVIAQYPGASAETISE
TVAGPLEQAINGIDDMLYINSVTSSSGTLTLTVTFDIGTDVEKANINVNNRVQSALSRLP
SEVQQTGVKVNKRSSSILKVVALYSDNASLDTVFIANYGLINVVDELARIPGIGEVRQFG
AKDYSMRIWLDPNKLAQFKLTPNDIAKAIKAQNSQFAAGRFGQEPMENGQAFTYTVTTAG
RLTDAKQFENIILRANNDGSILHLKDVARVELGAQAYNFNATYDGQPTVPMGVFLQPGAN
ALEASALIDAKLEELAQRFPKGLSYAIPYDTSEFVEISIEKVIYTLIEALILVVLVVYLF
LQNFRATLIPVLAIPVSIIGTFIGMYLLGFSINQLTLFGMILAIGIVVDDAIIVVENVER
IMSTYKLSAREATIKAMNEITGPIIAIVLVLGAVFIPVAFVGGLTGEMYKQFAITIVISV
TISGIVALTLTPALCANILKDGHLKPSGFFAGFNRFFAWITDGFSASVRTIMRYSAISLL
LFAGLLFITYQAVNGLPKSLLPQEDKGTLFVLSYLPPASSLSRMEEVRDGVSETLLAHPG
VEHAISFAGFDLQTFTEKTDSGVSFVKLKHWDERETADMSSQAIVGQLFGQLMAVPDAFS
IPIGMPTIMGMSMTGGFEAYLQSRGGDGSLALAKVTDELVAKASARPELQSVRTTFSTKV
PQYEVTLDREKAESMQVSAQEVFSAMQATFGSLYVNDFNLYGRAYKVNLQSEANFREKPE
DLAQVFVRSQSGEMIPLSALVTFKRLTGADVVDRFNLFPAAKLMGEPAPGYSSGQAIAAF
EEVAKEILPETYSLGWVGEAYQQKQSASAGNQAFLFGLLFVFLILAAQYERWSIPLAVVT
AVPFAVLGASVAMMLSGLDNDIYFELGLLTLIGLSAKNAILIVEVAKQKHKEGVPLAEAA
EHAARLRFRPIVMTSLAFTIAAVPLMLSTGAGAAAREAVGTGLVGGMIAATVFAPMFVPM
FFRWIAAFSERFDKPQAAEASSSAHSDK
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcaaaattttttattgatcgtccggtcatggccagtgtgttttcactgattatc
gttattgccggctttcttggaatgaaatcggtaccgattgccgaatatccgcaaattgtt
ccccctcaggttcaggtgatcgcccagtatccgggagcgagtgccgaaacgatttccgaa
accgtggctgggcctttggagcaagcgattaacggtatcgacgatatgctctatatcaat
agtgtcacctcatcgtccggtactttgacgctaacggtgacctttgatatcggtaccgat
gtggaaaaagccaatatcaatgtcaataaccgtgtgcaaagtgcattgagccgtctgcca
agcgaggtgcagcaaaccggtgttaaggtcaataaacgctcttccagcatcctcaaagtg
gtcgcgttatattcagataatgccagtttggacacggtttttatcgccaattacggtttg
atcaatgtggttgatgagctggcgcgtattcccggaatcggtgaagtccgtcagttcggt
gccaaagattactcgatgcgtatttggttggatcccaataaactggcacaattcaaattg
acgccgaacgatatcgccaaggcgattaaggctcagaactcgcaatttgccgccgggcgt
ttcggtcaggagccgatggaaaatggtcaagcatttacctatacggtgactaccgccggt
cgtctaaccgatgccaaacagttcgaaaacattatcctgcgtgccaataacgacggttcg
attctgcatctgaaagatgtcgctcgtgttgagttgggagcgcaagcctataacttcaat
gctacctatgatggtcagccaaccgtgcccatgggtgtgttcttgcaacctggggcaaat
gcgctggaagcatcagcgttgattgacgctaaactggaagagctggcgcagcgctttcca
aaaggcttgtcttacgccattccttacgatacttctgagtttgtcgaaatttccattgaa
aaggtgatctataccctaatcgaagcgttgattctggtggtattggttgtctatctgttc
ttacagaatttccgtgccaccttgattccggtactggccattccggtctcgatcatcggt
acttttatcggtatgtatctgcttggtttttctattaaccagctgacgctgttcggtatg
attctcgccataggtatcgtggttgatgatgcgattattgtggttgagaatgtcgagcgc
attatgagcacctataaactctcggcacgagaagccaccattaaggcgatgaatgaaatc
accgggccgattatcgccatcgtattggtattgggcgcggtgtttatcccggtcgctttt
gtcggcggtctgaccggagagatgtataagcagtttgccattaccatcgttatttcggtg
accatctccggtatagtcgccttaacgctgaccccggcgttgtgtgccaatatcttaaaa
gacggtcacttgaaaccgagtggtttttttgccgggttcaatcgtttctttgcctggata
actgatgggtttagcgccagcgtacgtacgattatgcgttacagcgcgataagcctgttg
ttgtttgccggtttgctgtttattacctaccaggcggttaacggcttgccgaaaagccta
ttgcctcaggaagataagggtacgttatttgttttgagttatctgccaccagcttcgtcc
ttgtcaagaatggaagaggtgcgtgatggcgtcagcgaaactttgcttgctcatccgggg
gtagaacatgcgatcagttttgccggtttcgatttacagacctttaccgaaaaaaccgat
tcaggtgtgtcttttgtcaagcttaagcattgggatgaacgagagactgccgatatgagt
tcgcaagcgattgtcggacagttgtttggtcagttgatggcggtgcctgatgcattcagt
attcccatcggtatgccgaccattatgggtatgagcatgaccggtggtttcgaggcttat
ctgcaaagccgtggtggtgacggttctttggctttggccaaggtcactgatgaattggtg
gccaaagcgtccgccagacctgaactgcagtctgtacgtaccaccttctcaaccaaggtg
ccgcaatatgaggtaacacttgatcgtgaaaaagcggaaagcatgcaggtatcggcgcaa
gaagtgttttctgcgatgcaggccacttttggcagtctgtatgtcaatgatttcaacctt
tatggccgtgcctataaggtgaatttgcagtccgaagccaattttcgtgaaaagccggaa
gacctagcgcaggtatttgtccgttcgcagagcggggaaatgattccattaagtgctttg
gtgacattcaaacgtttgaccggcgctgatgtcgtcgaccgtttcaacctgttcccggcg
gcgaaactgatgggggagccagcaccgggctacagttccgggcaggcgattgctgcattt
gaagaggttgccaaagaaatcctgccggagacttactctttaggttgggtcggtgaagcc
tatcagcagaagcagtcggccagtgccggtaatcaggcgttcctgtttggtttgttattt
gtctttttgattctggccgcccaatatgagcgctggtcgattccattagcggtggtgacc
gcagtaccgtttgcggtattgggagcctctgtggcgatgatgttaagcggtttggataat
gacatctattttgaactggggttattgaccttaatcggtttgtcggcgaagaacgccatt
ttgattgtcgaggttgccaaacagaaacataaagaaggtgtgccattggcggaggcggcc
gagcacgccgccagattacgcttccgtccgattgttatgacatccttggcctttaccatc
gctgccgtgccgctaatgttgagtaccggtgccggggcggctgcccgcgaagcggtcggt
accggtttggtaggcggtatgattgccgcaacggtttttgcgccaatgtttgtaccgatg
tttttccgctggattgccgcgttttcggaacgttttgataaaccgcaagccgctgaagct
tccagttctgctcatagcgacaaataa
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