Thiocapsa sp. M50B4: KFB96_13955
Help
Entry
KFB96_13955 CDS
T07253
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
thim
Thiocapsa sp. M50B4
Pathway
thim00521
Streptomycin biosynthesis
thim00523
Polyketide sugar unit biosynthesis
thim00541
O-Antigen nucleotide sugar biosynthesis
thim01100
Metabolic pathways
thim01110
Biosynthesis of secondary metabolites
thim01250
Biosynthesis of nucleotide sugars
Module
thim_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
thim00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
KFB96_13955 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
KFB96_13955 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
KFB96_13955 (rfbC)
Enzymes [BR:
thim01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
KFB96_13955 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QVL46858
LinkDB
All DBs
Position
complement(3072774..3073340)
Genome browser
AA seq
188 aa
AA seq
DB search
MKVIETAIPGVLILEPKVFGDERGFFMETYRTNRYAELGIPAPFVQDNLSYSGRGVLRGL
HVQHPHAQGKLVQVMDGEVFDVAVDIRRGSPTFGRWVGATLSGENRRQFWIPPGFAHGFL
VTGDSALFIYKNTDYYSPETELSLRWDDPEIGIDWPFEGTPELSAKDSAAACLSEISPER
LPDYEASL
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcatcgaaacggcaatcccgggtgtcctgatcctcgaacccaaggtcttcggc
gacgagcggggcttcttcatggagacctaccggaccaatcgctacgccgagctcgggatc
cctgcgccctttgtccaagacaacctgtcctactcggggcggggtgtcctgcggggcctg
catgtccagcatccgcacgcacagggcaagttggtgcaggtgatggacggcgaggtgttc
gacgtcgcggtcgatatccgtcgcggctcgccgaccttcgggcgctgggtcggtgcgacc
ctgtcgggagagaaccgacgccagttctggatcccgccggggttcgcccacggcttcctg
gtcaccggcgactcggccctcttcatctacaaaaacacggactattacagccccgagacc
gagctcagtctacgttgggacgaccccgagatcggcatcgactggccgttcgaggggacg
cccgagctctctgccaaggattcggccgcggcctgtctgagcgagatctcacccgaacgc
cttcccgattacgaggccagcctatga
DBGET
integrated database retrieval system