Thiohalocapsa sp. PB-PSB1: N838_00255
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Entry
N838_00255 CDS
T07019
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
thip
Thiohalocapsa sp. PB-PSB1
Pathway
thip01501
beta-Lactam resistance
thip01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
N838_00255
01503 Cationic antimicrobial peptide (CAMP) resistance
N838_00255
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thip02000
]
N838_00255
01504 Antimicrobial resistance genes [BR:
thip01504
]
N838_00255
Transporters [BR:
thip02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
N838_00255
Antimicrobial resistance genes [BR:
thip01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
N838_00255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
DUF6286
CCB1
Motif
Other DBs
NCBI-ProteinID:
QQO52035
LinkDB
All DBs
Position
53747..56893
Genome browser
AA seq
1048 aa
AA seq
DB search
MIVSDLSVTRPVLATVLSLLLVAFGLVAFDRLPLREYPDIDPPVVSIETVYPGAAANVVE
TRITQLIEDRIAGVEGIRTVESSSQDGRSDISVQFDIDRNIDGAANDIRDRVSGILDQLP
VEAEPPDIQKVDSNEDVIMWLNLVSEQMTVPELTDYARRYLVDRFSVLDGVARVRVGGNQ
TYAMRVWVDRSALAARGLTVADIEDALRAENLELPAGSVESIDRQFTVRLDRSFRTAADF
ARLVLAQGSDGYLVRLGDVARVQRGTEEDRTFFRGNGLPMVGIGIIKQSTANTIAVADAA
KAEMARINPTLPKGMEIKQSYDTSVFVKGAIREVYKTLGIAIGLVVLVIFLFLGSLRAML
VPAVTVPVSLVATFTVLYALGFSINILTLLALVLAIGLVVDDAIVVLENIHRRMEHYGET
RLVAAYRGTRQVGFAVIATTVVLAAVFVPIAFLQGDVGRLFSEFALTMAAAVGFSTFVAL
SLSPMLASQILPQAQGQAARRLSLSAGVDWAFSRVRRGYGLLLRLLIRQKWLVLLAFVAT
IFGAIWLYQHIPQEYAPKEDRGAFFVLVNGPEGASYSYMEEYMTEIERRLMPYADSGEAI
RVLVRAPRGFGGGAAFNTGIVIMVLNDFALRRPAQVIMNEIRAKLGGLPGVRAFPVMRQG
FGARIAKPVQFVIGGGSYEELAQWRDTLIEAMQADNPGLVGLDWDYKETKPQLRVRIDYD
RAADLGVKVGSVGRTLETMLGSRKVTTYIEEGEEYDVILEGERDSQRTPGSLANLYVRSE
RSGELIPLSNLVSIVEQADSQSLNRYNRIRAITLQANLADNLALGDALDYLEAKAREVLP
EQAQIDYKGQSRDFRDSAEGVLFVFVLGLLVVFLVLAAQFESWIHPLVIMLTVPLAMAGA
LFGLWWTGQTLNIYSEIGLIMLVGLSAKNGILIVEFANQLRDQGQEFREALLEAADVRLR
PIVMTGITTAAGSTPLLLSSGAGAETRAVIGTVILAGVLAATLFTLFVVPVAYDLLARRT
GSPGDVQRRLQREQKQAPGEPIADSELS
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgatagtatccgacctctctgttacccgtccggtcctggctacggtgttatcgctgttg
ctggtcgcctttggcctggtcgccttcgaccggctgccattgcgcgaataccccgacatc
gacccgccggtggtctccatcgagacggtctatcctggtgccgcggcgaacgtggtcgag
actcgcatcacgcaactgatcgaggaccgcatcgccggcgtcgagggcattcgcacggtg
gaatccagtagccaggacggtcgctccgacattagcgttcagttcgatatcgaccgcaac
atcgatggcgccgccaatgacatccgtgatcgcgtctcaggcatcctggatcagctcccg
gtggaggctgagccaccagacatccagaaggtggacagtaacgaagatgtgatcatgtgg
ctgaatctggtcagcgaacaaatgaccgtaccggaattgacggattacgcccgccgctat
ctggtggatcgcttttcggtgctcgacggcgttgcacgggtgcgcgtcggcggcaatcag
acctatgcgatgcgcgtctgggtcgaccgcagcgcactggctgcacgtgggctgacggtt
gccgacatcgaggatgccttgcgagcggagaacctggaattgccggccggcagcgtcgag
tccatcgaccgacagttcacggtgcgcctcgaccgcagcttccgcaccgccgcggacttt
gcccgcctggtactggcccagggtagcgatggctatctggtgcggctcggcgatgtggcc
cgggtgcaacgcggcaccgaggaggatcgcaccttcttccgcggtaacggcctgcccatg
gtcggcatcggcatcatcaagcaatccaccgccaacaccatcgctgttgccgatgccgcc
aaagccgagatggcgcgcatcaatcccacattgcccaaggggatggagatcaaacaaagc
tacgatacctcggtgttcgtcaagggcgccatccgcgaggtatacaagaccctgggcatc
gccatcggactggtggtgttggtgatcttcctgtttctcggctcattgcgcgcgatgctg
gtgccggcggtaaccgttccggtatcgctggtggccaccttcacggtgctctacgcgctt
ggcttttcgatcaatatcctgaccttgctggcgctggtgctggccatcggcctggtggtg
gatgacgccatcgtggtgctggagaacatccaccggcgcatggagcactatggcgagaca
cgcctggtggcagcgtaccgcggtacccggcaggtgggtttcgcggtgatcgccaccacg
gtggtactggcagcggtgttcgtgcccatcgcttttctgcagggcgatgtcggccgcttg
ttttccgaatttgcattgaccatggccgcggcggtgggattttccacttttgtcgctctg
tcgttgtcaccgatgctcgcatcccaaattctaccccaagctcagggccaggctgcccgg
aggctgagtttgagcgccggtgtcgactgggccttctcccgagttcgccgtggctacggc
ctgcttctgcggttgttgatccggcaaaaatggctggtattgctggcctttgtcgccacg
attttcggcgccatctggctgtatcagcacatacctcaggaatatgcacccaaggaagat
cgcggcgccttcttcgtgctggtgaatggcccggaaggggcttcttacagctacatggaa
gagtacatgacagagatcgagcggcgactgatgccctatgccgactccggtgaggcgatt
cgggtgctggtgcgcgcaccccgcggcttcggcggcggcgctgcattcaacaccggtatt
gtcatcatggtgctgaacgattttgccctgcgccgccctgcccaggtcatcatgaacgag
atccgcgccaaactcggcggcctgccaggtgtaagggcgttcccggtgatgcgccagggc
ttcggcgcacgcatcgccaagccggtgcaattcgtcatcggcggcggcagctacgaagag
ctggcgcaatggcgcgataccttgatcgaggccatgcaagcggacaatcccgggctggtc
ggtttggactgggactacaaggagaccaaaccgcaattgcgcgtgcgcatcgactatgac
cgtgctgccgacctcggcgtcaaggtcggcagcgtcggacgcacgctggaaaccatgctc
ggctcgcgcaaagtcaccacctacatcgaagaaggcgaggaatacgacgtgatcctggaa
ggcgagcgcgatagccagcgcactccgggcagcctggccaatctgtatgtgcgctcggag
cgcagcggcgagttgatcccattgtccaatctggtcagcatcgtcgagcaggccgattcg
caaagcctgaaccgctacaaccgcattcgcgccatcacattgcaggccaacctggccgac
aacctggcgttgggcgatgccttggactatttggaagccaaggcccgcgaagtattgcca
gagcaggcgcagatcgattacaagggccagagccgcgacttccgcgacagcgccgaaggc
gtcttgtttgtcttcgtgctcgggctgctggtcgtattcctggtgctggccgctcagttc
gaaagctggattcacccactggtgattatgctcaccgtcccgctggccatggcgggcgcc
ttgttcggcctttggtggactggccaaacgctgaacatctatagcgagatcggtctgatc
atgctggtcggactgtcagcgaaaaacggcatcctgattgtcgagttcgccaaccagctc
cgcgaccagggccaggaatttcgcgaggccctgctggaagccgccgatgtgcgcctgcgc
ccgatcgtgatgaccggcatcaccaccgccgctggctcgaccccgctgttgctcagttcc
ggcgccggcgccgagacccgcgcggtcatcggcactgtcattctggccggcgtgctggcc
gcgacattgtttaccttgttcgtcgtaccggtcgcttatgacctgctggccaggcgcacc
ggctcgccgggggatgtgcagcggcggttgcagcgggagcagaagcaggcgccgggcgag
ccgattgcggattctgaactatcctga
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