Thiohalocapsa sp. PB-PSB1: N838_02120
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Entry
N838_02120 CDS
T07019
Name
(GenBank) type II secretion system F family protein
KO
K02653
type IV pilus assembly protein PilC
Organism
thip
Thiohalocapsa sp. PB-PSB1
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
thip02044
]
N838_02120
02035 Bacterial motility proteins [BR:
thip02035
]
N838_02120
Secretion system [BR:
thip02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
N838_02120
Bacterial motility proteins [BR:
thip02035
]
Pilus system
Pilus assembly proteins
N838_02120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
DUF1129
Motif
Other DBs
NCBI-ProteinID:
QQO52361
LinkDB
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Position
complement(493499..494743)
Genome browser
AA seq
414 aa
AA seq
DB search
MAIAAAQKVKPKAGKAYEFTWEGIDRRGNRVKGELRASSIALARADLRRQGVNPKKVRKK
SQPLFGGGKKKITPLDISIFTRQLATMMSAGVPLVQSFDIVGRGHENPSMQELLLAIKQD
IENGTAMADALGKFPDYFDDLVCSLVAAGEAAGVLDILLDKIATYKEKTESIKGKIKKAL
FYPAAVIIVAILVTVVILLFVIPQFKVLFNSFGADLPAFTLLVIGLSDFVRKWWWAIGVG
VIGVVYGIGKLHQKSRKFRELIDRAALNMPIIGSILHKASVARFARTLSTMFAAGVPLVD
ALDSVSGATGNIVYSDAVQGMREEVATGQTLQFTMLQARLFPHMVVQMTAIGEESGALDD
MLGKVADFYEEEVDNAVDALSSLLEPLIMVVIGGLVGSLVIAMYLPIFKLAAVV
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggccatagcagcagctcagaaagtcaaacccaaggcaggcaaagcctacgaattcacc
tgggagggtattgaccgacgcgggaatcgggtcaagggcgaattgcgcgcaagcagcatc
gcgctggctcgtgccgatctgcgtcggcagggtgtcaacccaaagaaggtgcgcaagaag
tcacagccactgttcggcggcggcaaaaaaaagatcacaccgctcgatatctcgattttc
acccgccagttggcaaccatgatgtccgctggcgtaccactggtacagtccttcgacatc
gtcggccgtggccacgaaaacccctcgatgcaagaactcttgctggcgatcaagcaggac
atcgaaaacggcaccgccatggccgatgcgctcggcaaattccccgactatttcgacgac
ctggtctgcagtctggttgccgccggcgaggcagccggtgtcctcgatatcttgctggat
aagatcgcgacctacaaggaaaagaccgaatcgatcaagggaaaaatcaaaaaggccctg
ttctatccagccgctgtcatcatcgtcgccatccttgtcaccgtggtgatcctgctgttc
gttattccacagtttaaggtcctgttcaacagctttggcgcggatctgcccgccttcacg
ttgttggtcatcggactgtcagactttgtgcgcaaatggtggtgggccataggcgtaggt
gtgatcggtgtcgtgtacggaatcgggaagctacaccaaaagtcgcgaaaattcagagaa
ctgatcgaccgtgcagcactcaatatgccaattatcggcagcatcctgcataaggcttct
gtggcccgattcgcccgcaccctgtccaccatgttcgctgccggcgtgccgttggtggat
gcgctggattcggtttccggggctaccggcaacatcgtctattccgatgcagtacaaggc
atgcgcgaagaggttgcaaccggtcaaaccctgcaattcacaatgcttcaagcacgccta
tttccacatatggtggttcagatgactgctatcggcgaggaatccggggctctggacgac
atgctgggtaaggttgccgacttctacgaggaggaggtggacaatgccgtggacgcgctg
agcagcctgttggaacccctgatcatggtggttatcggcggcctggtgggtagtctggta
atcgcgatgtatctaccgatcttcaaattggccgcggtggtttga
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