Candidatus Thiothrix singaporensis: HZT40_14095
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Entry
HZT40_14095 CDS
T06729
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
this
Candidatus Thiothrix singaporensis
Pathway
this01501
beta-Lactam resistance
this01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
this00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HZT40_14095
01503 Cationic antimicrobial peptide (CAMP) resistance
HZT40_14095
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
this02000
]
HZT40_14095
01504 Antimicrobial resistance genes [BR:
this01504
]
HZT40_14095
Transporters [BR:
this02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HZT40_14095
Antimicrobial resistance genes [BR:
this01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HZT40_14095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
QLQ34232
UniProt:
A0A7L6AZD7
LinkDB
All DBs
Position
complement(2819972..2823154)
Genome browser
AA seq
1060 aa
AA seq
DB search
MWWKGCKRSGRASRSSRSWSARSNELCPVFIDRPIFAWVIAITIMLAGILAIPNLPVAQC
PDIAPPTISISATYPGASAKTVEDSVTQIIEQKMTGLDGLQYMSATSSAAGGTSISLSFI
AGTDPDIAQVQVQNKLQLAVPLLPDAVQQQGXKVAKSSTGFLLVIGFISEDGSMNQTDIA
DYIVTNIQDSVSRVEGVGDTQMFGAAYAMRIWLDPFKLNNYKLTPGDVKSAIQSQNVQVS
AGQLGAXPAVPNQQLNATVTAQSRLQTPEQFRAIVLRTSADGGVVRLSDVARVELGSENY
DVISRYKGKPASGLAVSLASGANALSTSEAVKAKLHDLEAYFPKGLQAVIPYDASPFIKL
SIEGVVETLLEAIVLVFVVMLVFLQNFRATLIPTITVPVVLLGTLAVLEAAGYSINTLTM
FGMVLAIGLLVDDAIVVVENVERLMVEEKLSPRDATRKSMEQITGALIGIALVLSAVFVP
MAFFGGSTGVIYRQFSITLVAAMSLSVLVALILTPALCASLLKPPKAGHGEHGFSGWFNR
GFDRSSRGYRGIVGRMVGKPMRHLVVYGLLLAALAILFLRLPTSFLPDEDQGSLFVMIQL
PPGATQERTLKVIQQVEQYFLTEEKDVLSSLFAIAGRGSAGSSQNLARAFVRLTDWSQRK
SPDKSAQAVAARAXEKLSSIRDAKVVAQAPPAVRGLGSAAGFDLELQDRGGLGHDALLAA
RDAFIKQASQNPDLTGVRANGQEDTSQYQIDIDIVQAGALGVSVASINDTLSTAWGGSYV
GDFIDRGRVKKVYVQGESFSRMLPDNLDLWFVRNAXGXMTPFSAFASGKWVFGSPLLERY
NGMSATEITGAPVTXVSSGTAMRLVEDIVKSLPPGIGYEWTGMSYQEQMSGAQAPLLYAI
SMLVVFLALAALYESWSIPFSVMLVVPLGVVGALLATYLRGLSNDVYFQVGLLATIGLSA
KNAILIVEFAKELMEQGYGLIEATLEAVRIRLRPILMTSFAFMLGVLPLVISTGAGSGSQ
HAVGTGVMGGMFAATVLGIFFVPVFFVVVRRIFPASDTAD
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
ttgtggtggaagggctgcaaaagatcaggccgggcgtcacggtcaagccggtcatggtcg
gcaaggagcaatgagttatgtcccgtttttattgaccgcccaattttcgcctgggttatc
gccatcaccattatgttggccgggattttggccatccctaacttgccggtggcgcaatgc
cctgacatcgccccaccgaccatttcgatcagcgccacttaccccggagcctccgccaaa
accgtggaggattccgtcacccagatcatcgaacagaaaatgaccgggctggatggcctg
caatacatgtccgccaccagcagcgcagcgggcggcaccagcatctcccttagctttatc
gccggaaccgaccccgacatcgcccaggtgcaggtgcagaacaagctgcaactggccgtg
ccgctgctgccggacgctgtgcagcaacaggggntgaaagtggcgaaaagctccactggc
ttcctgctggtcatcggcttcatttccgaagacggcagcatgaaccagaccgacattgcc
gattacatcgtcaccaatatccaggattcggtcagccgggtggaaggcgtgggcgacacc
cagatgtttggcgcggcgtatgcgatgcgcatctggctggacccgttcaaactgaacaat
tacaagctgacgccgggtgacgtgaaaagcgccatccaaagccagaatgtgcaggtgtcc
gccggacaactgggggcancgcccgccgtccccaaccagcagttgaatgcgaccgtcacc
gcgcaatcgcgcctgcaaacgccggaacagttccgcgccattgtcctgaggacttctgcg
gatggtggggtggtgcgcctcagtgatgtcgcacgggtggagctgggcagtgaaaactac
gatgtcatttcccgctacaaaggcaagcctgcctccgggctggcggtgtcgctggccagt
ggggcgaacgcgttgagcacatccgaagcggtcaaggccaaactgcacgatctggaagcc
tatttccccaaaggtttgcaggcggtgatcccgtatgatgcgtcgccgttcatcaagctg
tcgattgagggcgtggtcgagaccttgctggaggccattgtgctggtgttcgtggtgatg
ctggtgttcctgcaaaacttccgggcgaccctgatcccgaccatcaccgtgccggtggtg
ctgctggggactttggcggtgctggaagcggcgggttattccatcaataccctgaccatg
ttcggcatggtgctggcgatcggcctgctggtggatgacgccattgtggtggtggaaaac
gtcgaacgcctgatggtggaggaaaagctttcgccgcgtgacgccacccgcaaatccatg
gaacagatcaccggggcgctgatcgggattgcgctggtgttgtcggcggtgttcgtgcca
atggcgtttttcggcggttcgaccggggtcatttaccggcagttttcgatcacgctggtg
gcggccatgagcctgtcggtgctggtggcgctgatcctgacgcccgccttgtgcgcgtcc
ctgctcaagccgccgaaggccgggcatggcgaacatggcttttccggctggttcaaccgg
ggctttgaccgcagcagccggggttaccggggaatagtcgggcgcatggtgggcaaaccg
atgcgccatctggtggtgtatggtttgttgctggcggcgttggctatcctgtttctgcgt
ttgccgacgtcgttcctgccggatgaggatcagggttccctgtttgtgatgatccagttg
ccgccgggcgcgacccaggagcgcaccctcaaggtgatccagcaggtcgagcagtatttc
ctgactgaggaaaaggatgtgttgagtagcctgttcgccattgcggggcgggggtcggcg
ggcagcagccagaatctggcgcgcgcattcgtgcgcctgaccgactggtcgcagcgcaaa
tcgccggacaagtcggcacaggcggtggcggcgcgggcgnatgaaaaactaagcagcatc
cgtgacgccaaagtagtggcgcaggcaccgcctgcggtgcgcggtctgggcagcgcggca
ggctttgacctggagttgcaggatcgtggcgggctggggcatgacgccttgctcgctgcc
cgtgacgctttcatcaagcaggcgtcgcagaacccagacctgactggggtgcgcgccaat
gggcaggaggacaccagccagtaccaaattgacattgacattgtgcaggcgggcgcgctg
ggcgtgtcggttgccagcatcaatgacacgctgtccaccgcttggggtggctcctatgtg
ggcgatttcatcgaccggggacgggtgaaaaaggtttatgtgcaaggcgaatccttcagc
cgcatgttgccggataacctggacttgtggtttgtgcgcaatgcgncagggnaaatgacg
ccgttttccgcgttcgccagtggcaagtgggtattcggttcgcctttgctggaacgctac
aacggcatgtccgccaccgaaatcaccggcgcgccggtgacgngggtcagctctggcacg
gcgatgcggctggtggaggatattgtcaaatccttgccgccgggcattggttacgaatgg
acgggcatgtcctatcaggaacagatgtccggggcgcaggcaccactgttgtacgccatt
tccatgctggtggtgttcctcgcgctggcggcgttgtatgaaagctggtcgatcccgttt
tccgtcatgctggtggtgccgctgggcgtggtgggcgccttgctggcgacgtatctgcgc
ggcctgagcaatgacgtttatttccaggtcgggttgctggcgaccatcggcctgtcggcc
aagaatgcgatcctgatcgttgagttcgccaaggagctgatggagcagggttatggcctg
atcgaggccacgctggaagcggtgcggatacgtttgcggccgatcctgatgacgtcgttc
gcctttatgctcggcgtgctgccgctggtgatcagcaccggggctggctccggcagccag
cacgcggtgggcaccggcgtcatgggcggcatgttcgccgccacggtgctggggattttc
ttcgtgccagtgttctttgtggtggtgcggcggatttttcccgcgtctgacacggctgat
tag
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