Tarenaya hassleriana (spider flower): 104800686
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Entry
104800686 CDS
T04125
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03013
Nucleocytoplasmic transport
thj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104800686
03015 mRNA surveillance pathway
104800686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thj03019
]
104800686
03041 Spliceosome [BR:
thj03041
]
104800686
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104800686
Spliceosome [BR:
thj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
104800686
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
104800686
NCBI-ProteinID:
XP_010521878
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MSGGFFRGTSAEQDTRFSNKQAKLLKTQKFAPELEHLVDMAKVKMDVMKPWIANRVTELL
GFEDEVLINFIYGLLDGKVVNGKEIQISLTGFMEKNTTKFMKELWTLLLSAQKNASGVPQ
QFLDAKEAETRKKKEEADQLAIEIGKRRERENKELEHDVSKKMDSGAEPKGTSTAVESKL
LRERPEYGRKADEKNGVKERRRDPISPRRRDASPSPLRGSRSRSISKTSSASGSYSERKT
RSLSRSPEGSISPRKRRSSYSRRRSRSFSLSPRRRRVRSPYQSRSRSPVRRRRSRSPVRR
RSRSPDRRRRSRSPVRRHKSRSPVRRHRSRSPDGRRRSRSPDGRRRSRSPGGRRRSRSPD
GRRRSQSPDIRRRSRSPDRRRRSRSPDSRRRSPFYRRRQSPLPDRRRRSPTPPARRRRSP
SPPARRRRLPSPLPRSPSATSRSAGSPSPVRRGGLPSPAKRPSVPSSVGRESASPSPRGR
KNGLPSPPAGRRRSLTPAGRSDSESPSQVKRRGPPKRGSASPVRRRRSPSPSPSRDKRGG
SISPVTRRGRSPLPVSEKSQSPVRNRSPIPARQRPSSPSHRLSPPPARSTSPARDRSLKR
RNQRSPSTSRQDALSPVTCKSPDRRKRRSPSHSRSLSRSPSSTPVRRRSLSPTSRISRRE
RSPGQQPDERNKEDTDHKSKSSNKISVRSPESGKQKESLKKLEEVGGNRGHVKEHERKSE
RISRRRSPDARISPARRTHILEDKRQSDPSNVKEIEQVEKANHRDLDENFSSDSEGSRRH
RTKDKKRKHKRSEREEVSSDNDESYDSEVEHRKEAKRRRKEEKKSRKEEKKRRREERRRR
REGRRAEKSRLKNRDYSDTSEGEPEPDLGDEAHPKNGKEEDSDPKKLEIELRNKALESLK
AKKGAGQ
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcgggtttttccggggtacttctgctgaacaggatacgaggttttcgaacaag
caagccaagctcctgaaaacccagaaatttgctccggagttggagcacctggtggatatg
gccaaagtgaagatggatgttatgaaaccatggattgcaaatagggtcaccgagctgctt
gggttcgaagatgaagtactgattaacttcatttatggtctgctcgatggaaaggtagtg
aatggtaaggagattcagatatcactaactggattcatggagaaaaacactacgaagttc
atgaaagaactctggacgcttcttctaagtgcacagaagaatgctagtggtgttccacaa
cagttcttggatgctaaagaagcggaaaccaggaagaaaaaggaggaagcagatcagttg
gcaattgaaatagggaagaggagggagagagaaaataaggaacttgagcatgatgtatcg
aagaaaatggacagtggcgctgaaccaaagggtacaagtactgcagtggagtcaaagttg
ttgagagaacgtccagagtatgggagaaaggctgatgagaagaatggtgtaaaagaaagg
agaagggatccaatatctcctcgacgccgtgatgcatccccttcacccttgcgaggatcg
cgttctaggtcgatcagcaaaacaagttcagcctctggaagttactcagaacggaaaact
aggagcttgtcacggtcaccagagggctctatttcaccccgaaagcggaggtcatcgtat
tctagacgccggtccaggtcattttcgttgtctccccggcgacggagggttcgttctcct
taccaaagcaggtcccggtcacctgttaggcgccgcaggtcccgatcacctgttaggcgc
cggtcacgatcacctgatagacgtcgcaggtcacgatcacctgttaggcgccacaagtca
cgatcacctgttaggcgccacaggtcacggtcacctgatggacgtcgcaggtcacgatcg
cctgatggacgtcgcaggtcacgatcgcctggtggacgtcgcaggtcacgatcacctgat
ggacgtcgcaggtcacaatcgcccgatatacggcgcaggtcacgatctcccgatagacgc
cgcaggtcacggtctcctgatagtcgtcgccggtcaccattttacagacgccgccagtca
ccattgcctgatagacgtcgccggtcaccaacaccaccagccaggcgtcgcaggtcacct
tcgccccctgcaaggcgtcgcaggttgccttcaccgctgcctaggtcgccatcagcaacc
tctaggagtgcaggatctccttcaccagttagacgaggaggattgccttcgcctgctaaa
cggccctcagtgccatcatccgttggccgggaatctgcatcaccatcccctcgtggcagg
aagaacgggctgccatcacctcctgctgggagacgcaggtcactgacaccggctgggcgt
tctgattctgaatcaccttcacaggttaagcgtcgtggacctccgaaaagaggatcggca
tctcccgttcggcggcgtagatcaccatctccatcaccctcacgtgacaagcgtggtgga
tctatatctcctgtcactcgtcgaggtagatctcctttacctgtcagtgaaaagtcacaa
tctcctgttcggaacaggtcaccaatacctgcgagacaaaggccaagttctccttcacat
cgtttatcaccaccacctgcgagatccacgtctcctgcaagagatagatcattgaaacgg
cgaaatcaaaggtcaccatccacttcacgacaagatgcactctcccctgtgacatgcaaa
tcacctgatagacgcaagagacgatctccatcccatagcaggtctttatcaaggtcaccc
tcttcaactcctgttcgtcgtaggtctctttcgccaactagcaggatctcccggagggag
agatcacctggacaacagcctgacgagcgaaataaggaggacacagaccacaaatccaag
tcctcaaataaaatatcggtgcggtcccctgaatctggtaagcagaaagaatcactcaag
aagctggaagaagttggaggcaaccgaggacatgtgaaggagcatgaaagaaagagtgag
agaatttcccgccgcagaagtcctgatgcgcgtatatctccagctcgtagaacacatatt
ttagaggataagagacagtctgatccaagtaatgtgaaggagattgagcaagttgaaaaa
gcgaatcacagagacttggatgagaacttttcctctgattccgagggaagtagaaggcat
cgaactaaggataagaagagaaagcataaaagatcggagagggaagaagtttcttcagat
aatgatgagagttatgattctgaagtagaacatagaaaggaggctaaaaggaggaggaag
gaagaaaagaaatcgagaaaggaggagaagaaacgcaggcgagaggagaggcgtcgtagg
agggaaggaaggcgtgcggagaagtcaaggcttaagaatcgggattactccgatacttca
gaaggcgaacccgaacctgacttaggagacgaggcccatccaaagaatggaaaagaggag
gattcagatccaaagaagctggagattgagttgcgaaataaagcactcgagtcactgaaa
gcaaagaagggcgccgggcaataa
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