Tarenaya hassleriana (spider flower): 104809061
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Entry
104809061 CDS
T04125
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
thj
Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thj03016
]
104809061
Enzymes [BR:
thj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
104809061
Transfer RNA biogenesis [BR:
thj03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
104809061
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Wyosine_form
Flavodoxin_1
Radical_SAM
Motif
Other DBs
NCBI-GeneID:
104809061
NCBI-ProteinID:
XP_010533256
LinkDB
All DBs
Position
Unknown
AA seq
651 aa
AA seq
DB search
MSSSSSSSSSSIRARVTIVALLSVTTLYCFYQYRRLKRLRNLSLNPKSSSNSTRGKIFFI
SETGTAKTLAHRLHRLSASSDVAFDLVDPRSYEPEDLSKETLVITIASTWAGGKSPGNGE
FIVNWLSESADDFRVGSLLLSNCKFAVFGVGSRAYGETYNAVAKEWSKRMRELGGSEIFP
VGEGDVDDGELDRVFDDWCNGVIRFLKGGSVQSTNGVSQNGALESDGEIIESSGDEYEDN
DMEAEVVDVEDIAGKAPSKRNGSVNVTQMNGKKEMVTPVIRASLQKQGYKIIGSHSGVKI
CRWTKSQLRGRGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGKSWQWKMD
DPSEIVKTALELHTKMIKQMKGVPGVTTERLTEGLSPRHCALSLVGEPIMYPEINALVDE
LHQRRISTFLVTNAQFPERIKMLKPITQLYVSVDAATKDSLKAIDRPLFGDFWERFIGSL
KSLQEKKQRTVYRLTLVKGWNTEDIDAYFNLFNVGKPDFIEIKGVTYCGSSATSKLTMEN
VPWHSDVKAFSEALASKSGGEYQVACEHAHSCCVLLAKTDKFKVNGQWFTWIDYEKFHNL
VASGKPFTSEDYMAPTPSWAVYGAEEGGFDPEQARYKKERHHHQKPQTVSG
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcttcttcttcttcttcttcctccatacgagctcgtgtcactatcgtcgct
ctcctctcagtcaccaccttgtactgtttctaccagtaccgtcgcttgaaacgtctcaga
aacctctccttaaatcctaaatcctcatccaactccaccagaggcaagatctttttcatc
tctgaaaccggaacagcgaaaaccctagctcaccggctccataggctcagtgcatcgagc
gacgttgcctttgatctcgtcgatcctcggagctatgaacccgaagatctctccaaggaa
accttagtgattactattgcgtcgacttgggcgggcgggaaatcacctggcaacggagag
tttatagttaattggttgtcggagagcgctgatgatttccgcgtcgggtcgcttttgctc
tcaaattgcaagttcgcagttttcggcgtcggaagccgcgcgtacggcgagacgtacaat
gccgtagcgaaggaatggtcgaagcggatgagagaattgggaggctccgagatttttccg
gtgggagaaggtgatgttgacgacggtgaattggatagagtttttgatgattggtgcaat
ggagtgattaggtttctgaagggaggttctgttcaatcaacaaatggggtttcgcagaat
ggagctttagagagtgatggcgagattattgagtcttcaggtgacgagtatgaagataat
gatatggaggccgaggttgtcgatgttgaagacattgccggaaaagctccttcgaagaga
aacggttccgtaaatgtcactcaaatgaatgggaagaaagaaatggtgacccctgtgatc
agagcaagcttgcagaagcaggggtacaagatcattggttcacatagtggtgttaagata
tgtagatggacaaagtcccagcttagaggccggggaggttgctacaagcattcattttat
ggcattgagagtcacagatgcatggaagcaacacccagtttggcgtgtgcaaacaaatgt
gttttttgttggaggcatcacacgaatcctgtaggaaaaagctggcagtggaagatggat
gacccttcggagattgtaaagactgctctggagcttcatacaaaaatgattaaacagatg
aaaggagttccaggtgttacaacggagagattaacggaaggcctctctccaaggcattgt
gcattatctcttgttggtgagccaattatgtatccagaaatcaatgccctcgtagatgaa
ctacatcaaagacgaatttctacatttctagtgactaatgcacaattccctgagaggatt
aagatgttgaagcctatcacccagttatatgtaagtgtagatgctgcaacaaaagatagc
ctgaaggccattgataggcctctctttggagacttctgggagcgattcatcggttccctg
aaatctcttcaagagaaaaagcagcgaactgtataccgtttgacccttgtcaaaggctgg
aacacggaggacatagatgcgtatttcaatctctttaacgttggaaaacctgattttatc
gagatcaaaggtgtcacgtactgtggatcctctgcaacatcaaagttaacaatggagaat
gtaccatggcattcagatgtcaaagctttctccgaggctttagctagcaagagtggagga
gaataccaagttgcctgcgagcatgcccattcttgttgtgttcttctggccaaaactgat
aagttcaaagtgaatggacaatggttcacttggatagactatgaaaagttccacaatctg
gtggcttcgggaaaaccattcactagcgaggattacatggctcctacaccgtcttgggca
gtctacggggcagaggaaggtggatttgaccctgagcaggctcggtacaagaaggaacgt
catcaccaccagaaaccgcagactgtttcaggttaa
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