Tarenaya hassleriana (spider flower): 104813448
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Entry
104813448 CDS
T04125
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6-like
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03015
mRNA surveillance pathway
thj03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104813448
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104813448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thj03019
]
104813448
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
104813448
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
104813448
NCBI-ProteinID:
XP_010539328
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MDEGDGRDQVEQFHRNEAISAVADDGFLVEEDDDYEDLYNDVNVGEGFLQSLRKNDEVGF
RNEQQQKVIGENNQDRVDTAIAAPEHGVVIPGVGGESGDAAAAAAPTGPSGVSGGYGGQG
FKENEVSQQVPSGPVSGTVGGLRVELGQGSNRVNDVEPLRPNNGGQGLLPPPQNSGIPSV
NGARVPVGSAVGNGVAVAGSGVNTGASVGFATGGGSGGSNGTILFVGDLHWWTTDADLEA
ELCKYGAVKEVKFFDEKASGKSKGYCQVEFFDPVAATACKEGMDGHLFNGRPCVVAFASP
YTVKRMGEAQVNRSQQAQAAIAQAKRGGPADAANKPAASNIATSGNFQGGDNRGYGRGNW
GRGNAQGMGGRGPLGPMRNRPSAMGGRGIMGNGGGFGQPPMMHPQSMMGQGFDPAFGGPM
VRMGSFGGFPGMPAPPFPGLLSSFPPVGGVGLPGVAPHVNPAFFGRGMPMSGVGMMPGAG
VDGGSNMGMWDPNMGGWGGEETDGGRAAESSYGEEAASDHQYGEVNHDRGGRHNPVKEKE
RPPEREWSGSSDRRHRDDNKGAGYERDMPREKDSSHDHDWSERKHRDDRDTGRERERDHY
RDRERSRDRERERERDRDRERDRERDRHREERERYGDRRYRDEPERDEEWDRGRSSRTHS
KSRMSKEDDHRSRSRDADYGKRRRLTSE
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggatgagggagacgggagggatcaggtggagcagttccaccggaacgaggcgatctcc
gccgtcgccgacgatgggtttctcgtggaagaagatgacgactacgaggacctttataac
gacgttaatgtcggtgaaggttttcttcagtcgttgagaaagaacgacgaagttggattt
agaaacgagcagcagcagaaggtcatcggggaaaacaaccaagatagggttgacacagct
atagctgcgccggagcacggagtcgtgattcctggcgttggcggtgagagtggtgatgct
gcagcagctgctgctcctacaggcccgtcaggagtttctgggggatatggaggtcaaggt
tttaaagagaatgaggttagtcaacaagttccttctggacctgtttctggaactgtaggt
gggcttagagtagagctcgggcagggttctaaccgggtcaatgatgtcgaaccgttaaga
ccgaataacggtggtcagggtctcttgccgccgccgcagaactcgggaattcctagtgtt
aatggtgcgagggttcctgttggtagtgcggtcggtaatggggttgctgttgctggttct
ggggttaataccggagctagtgttggttttgctacaggcggtggcagtggtgggagcaat
gggacaatacttttcgtaggggatttgcattggtggacaacagatgcagacctcgaagct
gaattgtgcaagtatggggcggtgaaagaggttaagttcttcgatgagaaggctagtgga
aagtcaaaagggtactgtcaagttgagttctttgatcccgttgcggccaccgcttgcaaa
gaggggatggatgggcatctatttaatgggagaccatgtgtagttgcatttgcttcgccg
tatactgttaaaagaatgggggaggcccaggtgaataggagccaacaggcacaggctgca
attgcacaagctaagagagggggccctgctgatgcggctaataaacctgcagctagcaac
atcgctacaagcgggaatttccaaggaggggataatagaggttacggtagaggtaattgg
ggcagaggcaatgctcaagggatgggtggtagagggcctcttggtccaatgaggaacaga
cctagtgcgatgggtggaagaggtataatggggaatggtggagggtttggccagcctcct
atgatgcatcctcagtcaatgatgggccagggatttgatccagcttttggtgggccaatg
gtgagaatgggaagctttggaggcttcccggggatgccagcgcctccgtttccagggctt
ttgtcctcatttcctcctgtcggaggtgttggtttacctggagttgcaccacacgtcaat
ccagccttcttcggaagaggaatgcctatgagtggagtaggaatgatgcccggtgcaggt
gttgatggagggtctaatatgggaatgtgggatcctaatatgggaggatggggtggtgaa
gagacagatggtgggagagctgcagaatctagttatggggaggaagctgcatctgatcat
cagtatggagaggttaatcatgatagaggaggtcgtcataaccctgtgaaggaaaaagaa
agacctccggaaagagagtggtctggttcatctgatcgtaggcatcgtgatgataataaa
ggtgcaggttatgagagggacatgcccagggagaaagatagcagccacgatcatgactgg
tcagagagaaagcatcgggatgatagagacacaggcagggaacgtgagagggaccattat
agagatcgggaacgctctagagatcgtgagcgtgagcgtgaacgtgaccgtgatagagag
agggatagggagagagatcgacatagggaggagagagaaagatatggtgatcgtagatac
agggatgaacccgagcgtgatgaagaatgggacagaggtcgatcttcaagaacacatagc
aagtcacggatgtcaaaggaggatgatcaccgatcaagatcaagggatgctgactatggt
aagagaaggcggctgacctctgagtaa
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