Tarenaya hassleriana (spider flower): 104813731
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Entry
104813731 CDS
T04125
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42-like
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104813731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
thj03041
]
104813731
Enzymes [BR:
thj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104813731
Spliceosome [BR:
thj03041
]
Complex A
U2 snRNP components
U2 related factors
104813731
Complex B
104813731
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
FeoA
Motif
Other DBs
NCBI-GeneID:
104813731
NCBI-ProteinID:
XP_010539759
LinkDB
All DBs
Position
Unknown
AA seq
1180 aa
AA seq
DB search
MEEEKSKSRKDNFDVEKDDLKKSHRDQDRGKDRKKDKDSERRRERDRRRSGREKSSDCED
GYDREEDEERDKRREKEKEKERRRRERERDKRRSEREKSIDSGDDDREDDEREKRREREK
ERSHREQEKDSGKDRKRDRDREREEKRKRAKGKEREREDREKRDSDREEREVERDRERER
REGEREDREKDRREREKERDRRSRDKVRTQECDSEESDEDVRHRDRKRRRRDGEERKERE
HEKSVGRSSRHRDDSEDSLKRKIIEDESEKKEKKTREEELEDEQRKLDEEMEKRRRRVQE
WQELKRKKEEAEGEKHGDGNDNEPQAGKAWTLEGESDDEEPSTVDKSETEMDVDGEAKPG
NDEDAMLVDSEKGIAAAAASQEGDDGVDAEAEIDPLDAFMNSMVLPEVEKLSNDAPPPII
EDDNVDTKKNGKQNGEQLKKGSDKALGRIIQGEDSDSDYEEPENEDDPYVDEDDEDFMKR
VKKTKAEKLSLVDHSKIDYEPFRKNFYIEVKELSRMTQEEVTACRKELELKVHGKDVPRP
VKFWYQTGLTSKVLDTIKKLNYEKPMPIQTQALPVIMSGRDCIGIAKTGSGKTLAFVLPM
LRHIKDQPPVVAGDGPIGLVMAPTRELVQQIHSDIRKFTKVLGIRCVPVYGGSGVAQQIS
ELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQISRIIQNI
QPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVRPENERFWRLL
ELLGEWYEKGKILIFVHSQEKCDALFRDLLKHGYPCLSLHGAKDQTDRESTISDFKSNVC
NLLIATSVAARGLDVKELELVVNFDVPNHYEDYVHRVGRTGRAGRKGCAVTFISEEDARY
APDLVKALELSEQPVPDDLKALADNFMAKVKQGIEQAHGTGYGGSGFKFNEEEEEVRKAA
KKAQAKEYGFEEDKSDSEDDNDVVRKAGGDFSQQATLAQIAALAAAAKATAPMTAPVPAG
QLLPNGGGLAAMPNVLPVPGVAIPGAAVHSDGAARAAAIAAAINLQHNLAKIQADAMPEH
YEAELEINDFPQNARWKVTHKDTLGPISEWTGAAITTRGQYFPPGRALGPGERKLYLYIE
GPTEKSVKTAKTELKRVLEDITNQALSLPGGAQPGRYSVL
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagagaaatctaagtccaggaaggataatttcgatgtagagaaggatgatttg
aagaagagtcaccgagatcaggatcgaggtaaggaccggaagaaggataaagattcggag
aggcgtcgggagagggacaggagacgctctgggagagagaagagtagtgattgcgaagat
gggtacgatagagaggaggatgaagagagggataagcgtagggagaaggagaaggagaag
gagcggagacgtcgggaaagagagagggacaagagacggtccgagagagagaagagtatt
gattctggagatgatgatagagaggatgatgagagggaaaaacgtagagagagggaaaag
gagcggagccatcgggaacaagagaaagatagtggcaaagataggaaaagagatagagat
agagagagggaggagaaaaggaagagagcgaaggggaaagaaagagaacgggaggacaga
gagaagagggattctgatcgggaggagagggaggtggagagagatagagaaagagaaagg
cgggaaggtgagagggaagatagggagaaggataggagagaacgtgagaaagaaagggat
aggaggagtcgggacaaggtgaggacacaagagtgtgatagtgaagagagtgatgaagat
gtccggcatcgtgacaggaaacgcagaagaagagatggggaagaacggaaggaaagagag
cacgaaaagagtgttggtagatcaagcaggcatagagacgacagtgaagatagtcttaag
aggaagattattgaggatgagtctgaaaagaaagaaaagaaaaccagggaagaagaattg
gaggatgagcagaggaaattggatgaggagatggaaaaacggaggagaagagttcaagag
tggcaagagctgaagaggaaaaaggaggaagctgagggagaaaaacatggtgatgggaat
gataatgagccccaggctggtaaggcgtggactctggaaggagaatctgatgatgaagaa
ccctctacagttgacaaatctgaaacagaaatggatgttgatggagaagctaaacctgga
aatgatgaagatgccatgttggtggactctgagaaggggatagctgctgctgctgcctct
caggaaggagatgatggtgtggatgccgaagcggaaattgatcctttagatgcttttatg
aattctatggtactcccggaggtcgagaagcttagcaatgatgcccctcccccaatcatt
gaagacgataatgtggacactaagaaaaatggcaagcaaaacggtgaacaactgaagaaa
ggctctgataaggctcttggtaggataattcaaggggaagactctgattctgattatgaa
gagcctgagaatgaagatgatccgtatgtagatgaagacgatgaggatttcatgaagaga
gtaaagaagacaaaggcagagaaactgtcccttgttgaccattcaaagattgactacgaa
cctttccggaagaacttttatattgaagtgaaagagctctcaaggatgacccaagaagag
gtgaccgcttgcaggaaggaattggagttaaaggtacatgggaaggatgtaccacggcct
gtgaaattctggtaccagactggattaaccagtaaagttctggataccataaagaagctt
aattatgaaaagcctatgcctattcagacacaggcacttccggttataatgagtggtcga
gactgcatcggaattgcgaaaactgggtcgggaaaaactctcgcttttgtattaccaatg
ctgaggcatatcaaggatcagcctcctgtggttgctggggatgggccgattgggctagta
atggcacccaccagagagcttgttcaacagattcacagtgatatcaggaagttcaccaag
gtattgggtatcagatgtgtgcctgtgtatggaggatccggagttgcccagcaaatcagt
gagctgaaacgagggaccgagattgttgtgtgcactcccggtcggatgattgatattctt
tgcacgagcagcgggaaaatcaccaatctgaggagggtcacctacttggtcatggatgaa
gctgatcgcatgtttgacatgggttttgagccccaaatatctcggattattcaaaacatt
caaccggaccgtcaaactgtgctgttttctgccacctttccacgtcaagtcgaaattctg
gctcggaaagtgttgaacaaacccgtagagatacaggttggtggaaggagtgttgtgaac
aaggacatagcccagttagtcgaagtgagacctgaaaacgaaaggttctggagacttcta
gaacttcttggggaatggtacgagaaggggaaaattttgatttttgtccactcgcaggaa
aaatgtgatgccttgtttagggatttacttaaacatggttatccttgtctctctctccac
ggggctaaggatcagaccgatcgagaatccacgatatctgattttaagagcaatgtctgc
aatctgttgattgcaacaagtgttgcagctagaggtctagatgtgaaggagctcgagttg
gtggtaaatttcgatgttccaaaccactacgaagattatgtccaccgtgtgggcaggaca
ggcagggcaggacgaaaaggctgtgctgtcacatttatctcagaggaagatgcaagatat
gctccggatctcgtcaaggcactggaactgtccgagcagcctgttcctgatgatctgaag
gcccttgccgataacttcatggcgaaagtgaaacagggtattgaacaagctcatggaact
ggttatggtggtagcggatttaaattcaatgaagaggaggaagaagttaggaaagcagcg
aagaaagcacaagcaaaggagtatggttttgaggaagataagtccgattcagaagatgat
aatgatgttgtacgaaaggcaggcggcgatttctcgcaacaggctactcttgctcagata
gctgccctcgctgctgccgctaaagctaccgctcccatgactgctcctgtgcccgccggt
cagttgctgccgaatggtggcgggcttgctgctatgccaaatgtccttccagttcctggc
gtggctattcccggggctgccgttcacagcgatggggcagcccgtgctgcagccatagct
gctgccattaacctgcaacataacctggctaaaatccaagccgatgcaatgcctgaacac
tacgaggcagaattggaaatcaacgatttcccgcaaaatgctcggtggaaggttacccat
aaagacactctgggtccaatttcggagtggacaggagccgccattaccaccagggggcaa
tatttcccaccaggacgtgccctaggaccaggggaacgcaagctctacttgtacatcgaa
gggcctaccgaaaaatccgtcaagacagccaaaacagaactcaaacgtgttcttgaagac
attacaaatcaggccttgtcacttcccggtggagcacaacccggcagatactctgtctta
taa
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