Tarenaya hassleriana (spider flower): 104815647
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Entry
104815647 CDS
T04125
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104815647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
thj03041
]
104815647
03009 Ribosome biogenesis [BR:
thj03009
]
104815647
Enzymes [BR:
thj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104815647
Spliceosome [BR:
thj03041
]
Complex A
U1 snRNP components
U1 related factors
104815647
Complex B
104815647
Ribosome biogenesis [BR:
thj03009
]
Eukaryotic type
Pre-60S particles
Helicases
104815647
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
104815647
NCBI-ProteinID:
XP_010542432
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MSRYDSRTGDPASYRDRRSDSGFGGASAYGSSAAHGSSRRDYDDPGSPRKQDLAGLTPFE
KNFYVESPAVAAMTEAEVEEYRQGGGNTVEGRDIPKPVKTFHDVGFPDYVMEEIVKAGFS
EPTPIQSQGWPMALKGRDLIGIAETGSGKTISYLLPAIVHVNAQPILALGDGPIVLVLAP
TRELAVQIQQEASKFGSSSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESN
HTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLAKKFLY
NPYKVLIGSSDLKANRAIRQLVDVVSENQKYNKLVKLLEDIMDGSRILIFLDTKKGCDQI
TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD
FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELISILEEAGQRVSPELAAMGRG
APPPPPGGFRDRGSRYGSGRGWS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgctacgacagtcgcaccggcgatcccgcttcctatcgggaccgtcgaagtgac
tcagggtttggtggggcttcagcatatggcagctcggcagctcatggatcaagcagaaga
gattatgatgatcctggatcaccacggaagcaagatttggccgggttgactccctttgag
aagaacttctatgtcgagtcccctgcggtggcagccatgactgaggcagaagtggaagaa
tatcggcagggggggggaaacaccgttgaaggccgagatattccaaagcctgtaaaaact
tttcatgatgttgggtttcctgactatgtcatggaagagatagtgaaggccggtttttct
gaacctacacctatacaatctcaggggtggccaatggcgttgaaagggcgtgacctaatt
ggcattgctgaaactggatctggaaagactatttcatatttactaccagcaatagtccat
gtcaatgcccaaccaattttagctctaggggatggcccaatcgtcttagttcttgctcct
acccgtgaacttgcagtgcaaatccaacaagaggcatctaaatttggttcatcatcgaag
attaagagcacttgcatctatggcggagttccaaaaggacctcaagttcgtgatctccag
aaaggtgttgaaatcgttatagctactcctgggaggttaatagacatgttggagtcaaac
cacactaacttacggagggttacttaccttgttttggatgaggccgataggatgctagat
atgggatttgagcctcagatacggaaaatcgtttcacagattcggccagaccgtcagact
ttgtactggagtgctacttggcctaaggaggtggagcaattggctaagaaatttctttat
aatccatataaagtgcttataggatcttctgatttaaaagctaatcgtgcaatccgacaa
cttgttgatgttgtttccgaaaaccaaaaatataacaagttggtgaaattgctcgaagac
ataatggatggaagcagaatactcatctttcttgatacaaaaaagggttgtgatcagata
actcggcagctccggatggatgggtggcctgctctgtcaattcatggagataaaagtcaa
gccgagagggattgggttctgtcagagttcagatcggggaaaagtcctataatgactgcc
acggatgttgcagctcgcgggttagatgtgaaagatgtgaagtacgtgataaactacgac
tttccgggatccctggaggattatgttcatcggattggacggactggtagggcaggagcc
aaaggaacagcctacactttcttcacggctgcaaacgcaagatttgctaaagaacttatt
agcattctcgaagaagctggacagagggtcagccctgagttggccgccatgggccgtgga
gcccctcctcctcctccaggagggttccgagatcgtgggagtagatacggcagcggacga
ggttggagctga
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integrated database retrieval system
