Tarenaya hassleriana (spider flower): 104822429
Help
Entry
104822429 CDS
T04125
Name
(RefSeq) polyadenylation and cleavage factor homolog 1-like
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104822429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thj03021
]
104822429
03019 Messenger RNA biogenesis [BR:
thj03019
]
104822429
Transcription machinery [BR:
thj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104822429
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
104822429
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_4
MipZ
OxoGdeHyase_C
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
104822429
NCBI-ProteinID:
XP_010551956
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MSSNMFFANTRPQRSGNADLKRRWDDRSRVGGFQGYPHQKRARAQTPSQFPSANPNNLPL
YHRSSIPRVSGSYGSQVFPMSGSYVRGLGSSNVSNNVVPNRFSPALPNNDTSMPLFVSSQ
PLTNHNHQYLSGYGSCNSNSLPRQVHNDVSLDSLPEWNPNEPTSQIRNGLAPSVTFNNFP
ARSRDFIRYVSAPSNGANSGSLLPLVMPNSKQPLMGNGSSDLVRNFKNSGLVPPNDVSKQ
NAGIQDGILGTEFDMSLLRVRHESVIKSLYSDLPRQCSSCGQRFRCQEEHRNHMDWHVRK
NRMAKDTSKNPRKIPTLNNKSRKWFASTGLWLSAATGEQLDDQAVAELFDSEKETRKNDD
EEFVVPADDDQKTCALCEEPFEDFFSDDADEWMYKGAVYLHKHDDNQGGTRTGINVSKLG
PIVHAKCMPEKTRKSSTQDLRPQNLIPVSVPSARTLIC
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgaacatgttctttgcgaacactcgccctcaacggagcgggaacgccgatttg
aagagacgatgggacgatcgcagtcgcgtgggaggcttccagggttaccctcaccagaag
cgggcgagagcgcaaacgccatcgcagtttccatcggcaaaccctaacaatcttcctctg
tatcatcgtagtagcatacctagggtttctggttcatatggttctcaggtctttcccatg
tcgggttcttatgttcgtggtttgggttcttctaatgtaagtaacaacgttgtaccaaat
cgtttctctcctgctctacctaacaacgatacgtctatgcccttgttcgtatcatcgcaa
cctttgactaaccacaatcatcaatacctgtctggttatggaagctgtaattcgaattcg
ttgccacgacaagtacacaacgatgtgtcgttggactcgttgcctgagtggaatccgaac
gaacccacatctcagatccgaaacgggcttgcgccgagtgtgacttttaacaattttcct
gctcgatctcgcgatttcattagatatgtctctgcgccctctaatggcgcaaattcaggt
tcgcttctaccactcgtaatgcccaattcaaagcaacctttgatgggcaatggctcatca
gatttggtaagaaacttcaagaacagcggtcttgttcctccgaatgatgtgtcgaaacag
aacgctggaatccaagatggcattttgggaacagagttcgacatgtcgttacttagagtt
agacatgaatctgtcataaagtctctgtattctgatctcccaaggcagtgcagttcatgt
gggcaaagattcagatgccaagaagaacacaggaaccacatggattggcatgtcaggaag
aacaggatggccaaagacaccagcaagaatccaagaaagattccgacactgaacaacaag
tctcgtaagtggtttgccagtacggggttatggctcagcgcagcaactggagagcaactc
gacgatcaagcggttgcagaattgttcgattcggaaaaagaaacccggaagaatgatgac
gaggaattcgtcgttcctgcagatgacgatcagaagacatgcgctttatgcgaggagccg
ttcgaagatttctttagcgatgacgccgatgaatggatgtacaagggagctgtgtactta
cacaagcacgatgataaccagggagggacaagaactggcatcaatgtatcaaagttaggt
cccatagttcatgctaagtgcatgcctgaaaaaacccgaaaatcttccacacaggatctg
agaccacagaatctgataccagtttcggttccatctgcaagaacactgatctgctga
DBGET
integrated database retrieval system
