Tarenaya hassleriana (spider flower): 104826582
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Entry
104826582 CDS
T04125
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A isoform X1
KO
K07466
replication factor A1
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03030
DNA replication
thj03420
Nucleotide excision repair
thj03430
Mismatch repair
thj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104826582
03420 Nucleotide excision repair
104826582
03430 Mismatch repair
104826582
03440 Homologous recombination
104826582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
thj03000
]
104826582
03032 DNA replication proteins [BR:
thj03032
]
104826582
03400 DNA repair and recombination proteins [BR:
thj03400
]
104826582
Transcription factors [BR:
thj03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
104826582
DNA replication proteins [BR:
thj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
104826582
DNA repair and recombination proteins [BR:
thj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
104826582
MMR (mismatch excision repair)
104826582
DSBR (double strand breaks repair)
HR (homologous recombination)
104826582
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
TMEM219
Motif
Other DBs
NCBI-GeneID:
104826582
NCBI-ProteinID:
XP_019059678
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MPVNLTPNAISAINAGDVNSRPLVQVLDIKLIGSNRERQEMTKNQERFRFLISDGVSAQH
AMLATQLNDRVKTGQVKKGSVIQLIDYICSAVQGRKIIVVLNMETIIPDCEIIGNPKTST
ESEPGAQKPSSVLGNLQPPNRVVSNESDFQNPVNKAPPRGVIQNQANSAPNFRPSVQPAY
QPPPNYRNHGAIMKNEAPARIIPIAALNPYQGRWAIKARVTAKGEIRRYNNARGDGKVFS
FDLLDSDGGEIRVTCFNAVVDRFYDVIEVGKVYLISKGSLKPAKKNFNPLKNDWEIFLES
TSTVDLCPDEDGSIPRQQFSFRPISDIENAENNSIFDVIGVVTSVNPSVPILRKNGMETQ
RRILNLKDESGKTVELTLWGDFCNRDGRELEDMVDSGFYPVLAVKAGKVSDFSGKSIGTI
SSTQLFINPDFPEARRLRDWFDRGGKDAASMSISRDGISGAPKNEIRKTVSQIKDEGLGR
SDKPDWVTVKATITFIKTDNFCYTACPLMIGDRQCNKKVTRTGQNRWLCDRCNKEMDECE
YRYLLQVQIQDHTGLTWVTAFQEAGEEIMGCPAKQLYNLKYELQDDTNFSEIVRGRLFRE
YLFRLKIKEEMYGDEQRVKITVVKVDEVNYSSESKHLLESLSRLHS
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgaacttgactccgaacgccatctcggcgataaacgccggcgacgtgaactcg
aggcctctggttcaggttctagatatcaagctgatcggaagcaaccgggagagacaggaa
atgacgaagaaccaggagaggttccgtttcctcatctccgatggcgtctcggctcagcac
gcgatgctcgcgactcagctcaacgaccgagtcaagactggtcaggttaagaagggctcc
gtcattcagctcattgattacatctgcagcgccgttcaaggccgcaagattattgtggtg
ctcaacatggagactataatacctgattgtgaaattatcggaaaccccaaaacatcaaca
gaatcagaaccaggggctcaaaaaccatcatcagttcttggcaatttacaaccgccaaat
agagtggtttctaatgaatcggattttcagaatcctgttaataaagcaccacccaggggt
gtaattcaaaatcaagccaacagcgccccgaatttccggccatctgttcaacctgcatat
caaccacctccaaactacagaaatcatggagcaataatgaagaatgaggctccagctcga
atcattcctattgctgctctcaatccataccaaggtcggtgggctattaaggctagagta
acagcgaaaggagagatcaggcgatacaacaatgcccggggagatgggaaggttttctcc
tttgacctgcttgattctgatggaggggagatacgtgttacctgtttcaatgctgttgtt
gaccgcttctatgatgttatcgaggtcggcaaggtgtacttgatttcaaagggaagcttg
aagcctgctaagaaaaatttcaaccccttgaagaatgattgggagattttcttggagtca
acctcgactgtggatctttgccctgacgaagatggctccataccaagacagcagttctcc
ttccgacccataagcgacatcgagaacgctgagaacaattccatatttgatgtcattggg
gttgtaacttctgtgaatccctcggtcccgatattgaggaagaatgggatggaaacccaa
agaagaatcctaaatctgaaggacgaatctggcaagactgtagagcttacactatggggg
gatttctgcaacagagatggtcgagaacttgaagacatggtcgactctggcttttaccca
gttttagcagtcaaagctggaaaagtgagcgacttcagcgggaagtcaattgggacaata
tcttcaacccagctctttataaatcccgattttccagaagctcgtagattgagagattgg
tttgatcgagggggaaaggatgctgcctccatgtccatctctagagacggtatttctggg
gctcccaagaacgagatacgcaaaactgtgtctcagatcaaagatgaaggtctcgggaga
tcagataagccagactgggtcacagtgaaagcgaccattacgttcatcaaaaccgataat
ttctgttacacagcttgcccattgatgatcggagatagacaatgcaacaagaaggtaaca
cggacaggacaaaacaggtggctatgtgaccggtgcaataaagagatggacgaatgtgaa
tacagatatcttcttcaggtgcagatccaagaccacacgggtttgacctgggttacagcg
tttcaggaagccggtgaagaaatcatgggatgtccggccaaacagctatacaatttgaaa
tacgaactacaggacgatacaaatttctcggagattgttcgaggcagactctttcgtgag
tacctcttcaggctcaagatcaaagaggagatgtatggcgacgaacaaagagtgaagatc
acggtcgtcaaggtggacgaggtgaattactcgtccgaaagtaaacacttgctcgaatcg
ctctcgaggttacatagttag
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integrated database retrieval system
