Tarenaya hassleriana (spider flower): 104826748
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Entry
104826748 CDS
T04125
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03013
Nucleocytoplasmic transport
thj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104826748
09122 Translation
03013 Nucleocytoplasmic transport
104826748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thj03019
]
104826748
03041 Spliceosome [BR:
thj03041
]
104826748
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
104826748
Spliceosome [BR:
thj03041
]
Complex C
Other components
EJC/TREX
104826748
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104826748
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Herpes_UL92
CENP-X
CarD_C
Motif
Other DBs
NCBI-GeneID:
104826748
NCBI-ProteinID:
XP_010557906
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MDAFRDAILQQGAIESFALKTIQEFIKPQKQTKLVQDENQMLENMLRTLLQELVASAAQS
GEQIMQYGQSIDDGDNIQGQIPHLLDVVLYLCEKEHIEGGMIFQLLEDLTEMSTMKNCKD
VFGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSE
RSAVNIKGVFNTSNETKYEKDPPTGISVDFNFYKTFWSLQEVFCNPASLTGAQTKWQKFT
SSLMVVLNTFEAQLLSEEEGEANSLEEEAATFNIKYLTSSKLMGLELKDSSFRRHILLQC
LILFDYLRAPGKNDKDLPSESMKEELKSCEDRVKKLLEITPPKGKEFLRAVEHILEREKN
WVWWKRDGCPPFEKQPIEKKSLQAGQKKRTQRWRLGNKELSQLWRWADQNPNALTDPQRV
RTPAIAEYWKPLAEDMDPSAGIEAEYHHKNNRVYCWKGLRFTARQDLEGFSRFTDHGIEG
VVPVELLPPEVRSKYQTKPSEKSKRAKKDETKGTSQPPEGNQSAASASEPENDGARADTE
TFAEHMETDAVAVTGDVSQANTPTPEEQQKLGSDTDNGQEPGQIEAGADVEPGMIEGETD
P
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgtttcgagatgctattctgcagcaaggcgctattgaaagttttgcactaaag
accattcaagagttcataaagcctcagaaacaaacaaagttggtccaagatgaaaaccaa
atgcttgagaacatgctccggacgttgcttcaagagctagtggcttctgctgcacagtcc
ggtgaacagataatgcaatatggtcagtcaattgatgacggagataatatacagggacag
attcctcatctcctagatgttgtgctttatctttgcgagaaagaacatatagaaggtgga
atgatattccagctgctagaagatttgacggaaatgtctaccatgaaaaattgtaaagat
gtttttggttatatagaaagtaagcaagacatattgggcaagcaagagctttttgcacgt
ggaaaacttgtgatgttgagaacatgcaatcaacttcttcgtcgactttcaaaggccaat
gatgtggtattttgtggaaggattctcatgtttctagctcacttttttccattatctgaa
cgctcagctgttaatataaaaggtgttttcaacacatctaatgaaaccaaatatgaaaaa
gacccccctactggcatttctgtggatttcaatttctataagaccttttggagtttgcag
gaagttttctgtaatcccgcttctctgactggcgcacaaaccaaatggcagaaatttaca
tctagcttgatggttgtgttaaacacctttgaagcacaactgctaagtgaagaagagggg
gaggctaatagtttggaggaagaggcagcaacttttaacattaagtacctcaccagtagt
aaattaatgggtttagagttaaaggattctagtttccgtcgacatattcttctccagtgc
ctcattttgtttgattatctgagggcaccaggaaagaacgacaaagatttgccttctgaa
agcatgaaggaagaactcaagtcatgtgaggatcgtgtaaagaaattgcttgagatcact
ccacctaaagggaaagaattcctccgtgcagttgagcatatactggaacgtgaaaagaac
tgggtctggtggaaacgtgatggatgcccgccatttgaaaagcaaccaatcgagaaaaaa
tcacttcaagcagggcagaagaaacggacacaaaggtggagactgggcaataaagaactc
tctcaactgtggagatgggcagaccagaatccgaacgctttgactgaccctcaacgagtc
cgaactcctgccattgcagagtactggaaaccattagcagaggatatggacccatctgcg
ggtatcgaagcagaatatcatcacaaaaacaatcgggtctattgctggaaagggctacgc
tttacggctagacaagacctggaaggattctctagattcactgatcatggaatagaaggg
gttgtacctgtagaactgttgcctcctgaggtgaggtccaaataccaaactaaaccctcc
gagaagtcgaaacgtgcaaagaaagatgaaaccaaaggcacatcacaacctcccgaggga
aatcagagtgctgcttctgctagtgaacccgagaatgatggagcgagagctgacacagaa
acattcgcggagcatatggagactgacgctgttgcagtgaccggtgatgtttcccaagct
aacactcctacaccagaggaacagcaaaagctcggttcggacacagataatggtcaagag
cctggacaaatagaggcaggtgctgacgtggagccaggcatgatcgaaggagagaccgat
ccatag
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