Tetragenococcus halophilus NBRC 12172: TEH_00060
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Entry
TEH_00060 CDS
T01640
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
thl
Tetragenococcus halophilus NBRC 12172
Brite
KEGG Orthology (KO) [BR:
thl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thl03032
]
TEH_00060 (gyrA)
03400 DNA repair and recombination proteins [BR:
thl03400
]
TEH_00060 (gyrA)
Enzymes [BR:
thl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
TEH_00060 (gyrA)
DNA replication proteins [BR:
thl03032
]
Prokaryotic type
DNA Topoisomerases
TEH_00060 (gyrA)
DNA repair and recombination proteins [BR:
thl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TEH_00060 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-GeneID:
11261079
NCBI-ProteinID:
BAK93332
LinkDB
All DBs
Position
6128..8593
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AA seq
821 aa
AA seq
DB search
MRDQENHVHDINLSSEMRGSFIDYAMSVIVARALPDVRDGLKPVHRRILYGMSELGVTPD
KPHKKSARIVGDVMGKYHPHGDSAIYEAMVRMAQTFSYRYVLVDGHGNFGSVDGDGAAAM
RYTEARMSRLSVEMLRDLNKDTVDFIGNYDDTEKEPEVLPARFPNLLVNGTTGIAVGMAT
NIPPHNLGEVVAAIDRLIENPEVTTNELMEVLPGPDFPTGGLVMGKSGIRRAYETGKGSI
TVRGKVEISEMANGKERILVTELPYMVNKAKLIERISELHRDKRIEGITDLRDESSREGM
RIVVDVRRDVSASVVLNNLYKMTALQTSFGFNMLAIENGVPKILNLKQILEDYLEHQKDV
ITRRTIFEKQKAEARAHILEGLRIALDHIDEIIAIIRGSETDAQAKETMMAQFKLSDRQS
QAILDMRLRRLTGLERDKIENEYQDLLKQIEDLTDILARPERVIEIIQTELHEIEQRFGD
KRRTELLVGEVLSLEDEDLIEEEEIVVTLTNNGYIKRAANSEFRTQNRGGRGVQGMGIHD
QDFVTTLVSCSTHDNLLFFTNAGKVYKAKGYEVPEYGRTAKGIPVINFLGVNSNERIQTI
IALPNESEERKYLFFTTKYGVVKRTSVESFKNIRSNGLIAIGLKEDDELVNVLSTSGDDV
VIIGTHNGYSVTFKEEAVRDMGRTASGVRGIRLRSEDYVIGASVIKEDDEVLVITEKGYG
KRTSEDQYPVKGRGGKGIKTANITEKNGPLAGLTTVSGNEDVMLITDRGVIIRFHVDDIS
QTSRATLGVRLMKMEDDAKVVTMTTVDAKELEKVEEESIEE
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
ttgagagatcaagaaaatcatgttcatgatattaatttatcaagtgaaatgcgcggatcc
tttatcgattatgcgatgagcgtcattgtagccagagcgctgcctgatgttcgtgacggg
ttaaaaccagtccatcgacgaattttatatggtatgagtgaattaggggttacaccggat
aaaccgcataaaaaatccgctcgtatcgtcggagatgtcatggggaaataccatcctcat
ggcgatagtgcgatttatgaagccatggtaagaatggcacaaacttttagttatcgctac
gttttagttgatgggcacggtaactttggttctgttgatggagatggcgccgcggcaatg
cgttatacagaggctcgtatgagtcgtttatctgttgaaatgttgcgtgatcttaataaa
gataccgttgactttattggaaactatgatgatacagaaaaagaacccgaggtattacct
gcccgtttccctaacttattggttaacggcacgacagggattgctgtaggtatggcaacc
aatattcctccgcacaacctaggtgaagtcgttgcagctatcgatcgtttgattgaaaat
ccagaagtaacgacaaatgaattaatggaagtattacctggtccagattttcctacaggc
ggtttagtgatgggaaaatcaggtatccgacgtgcttatgaaacagggaagggttcaatc
actgtaaggggtaaagtagaaattagcgaaatggctaatggtaaagaacgtattttggtt
acagaattaccttatatggtcaataaagctaaattgattgaacgaatctctgaacttcat
cgagataaaagaattgagggcatcaccgacttacgtgatgagtcttcacgtgaaggaatg
cgaattgttgttgatgtaagacgtgatgtgagtgcttcggttgttttaaacaatctgtat
aaaatgactgctttacaaacatcttttggttttaacatgttagctattgaaaatggtgtt
cctaagattcttaacttaaaacaaatcttagaagattatttagaacatcagaaagatgtt
attactcgtcgaacaatttttgaaaaacaaaaggctgaagctcgagctcatattttagaa
ggtttacggattgctttagatcatattgatgagattattgcaattattcgtggttctgaa
acagatgctcaggctaaagaaacgatgatggcgcaatttaaactatctgatcgtcagtct
caggcgattttggatatgcgtttacgccgcttaactggtttagaacgagataaaatcgaa
aatgaatatcaagatttactaaaacaaatcgaagatctaactgatatcttagctagaccc
gaacgagtgattgaaattattcaaactgaactacatgaaatcgaacaacgttttggcgat
aaacgtcgtacggaattgttggttggtgaagttttaagtttagaagacgaagatctaatt
gaagaagaagagatcgttgttaccttaaccaataatggctatattaaacgtgcagctaat
agtgaatttagaacacaaaatcgcggcggacgcggtgttcaaggtatgggaattcatgat
caagactttgttaccaccttggtatcttgttctacgcatgacaatttattgttttttact
aatgcaggaaaagtttataaggcaaaaggatacgaagtaccagaatatggacgtacagct
aaaggaatccccgtcattaatttcttaggtgtcaattccaatgagcggattcaaacgatt
attgctttaccaaatgaatcagaagaaagaaaatatcttttctttacaacgaaatatggt
gtagtaaaacgtacttcagtagaatcctttaaaaacattcgtagtaatggtttaattgct
ataggcttaaaagaagacgatgagctggttaatgttttaagtaccagtggagatgacgta
gtaatcataggtactcataatggctattctgtcacctttaaggaagaagcagttcgagat
atgggacgtactgctagtggagttcgagggattcgtttaagatcagaagactatgtgatc
ggtgcttctgttattaaagaagatgacgaggtattggttattacagaaaaaggttacggt
aaacgtaccagtgaagatcagtatccagtaaaaggccgtggtggtaaagggataaaaaca
gctaatattactgaaaaaaatggtccattagcaggtttaacaaccgtttcaggcaatgaa
gatgttatgctgattaccgacagaggtgttattattcgcttccatgttgatgatatttca
caaacaagccgtgcaacattgggtgttcgtttgatgaaaatggaggatgacgccaaagtt
gttactatgacaacagtagatgcaaaagagttggaaaaagttgaagaagagtcaatagaa
gagtaa
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