Thiomicrorhabdus immobilis: THMIRHAM_16740
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Entry
THMIRHAM_16740 CDS
T08420
Name
(GenBank) ATP-dependent helicase
Organism
tib
Thiomicrorhabdus immobilis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_22
AAA_30
DEAD
Mg_chelatase
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BCN93889
LinkDB
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Position
complement(1860050..1863709)
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AA seq
1219 aa
AA seq
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MSPTMQQGSLFSIADSANQPGLVESHAGMNNHFLEQHFGLQADETLPDGLARFQGVYPHH
SFIVQAPAGSGKTSLLAQRFLALLSQVNSPEQIVAMTFTKKAAAEMRERIVEALMLGEKP
LADNANLVESNTWKLARKALQRDQEQGWSLLKNPNRLRIKTIDGLNSYLVGQMPLLSKMG
GQSQLLQDATPAYQEAVRQVLKMPQLEEPVGRLLRLVNGRFGRAESLLMNMLAKRDQWMR
TLIQYQGEAAREVLEQALQEIVNKVLAEQLGALYYLKPAFEEVCSIAEYAVQNDQPQLAI
LCGAWPIAEDTSETEKWRVLADWLLTNQNEVRKTVTKNNGFPAGKGEAKEQKDRFLAVLE
QVRVAAASHSEVLPGLVTLKNLPQPDYTDEQWQDLQWLIQLLTLSAGFLKLVFQQTGQAD
YIEIAQAASQALGSELEPTDLAQQLDYQIQHLLVDEFQDTSSEQYKLLKQLIAGWQPDDG
RTLFLVGDPMQSIYRFREAEVGNFLEAWQGQLGSVRLKQLNLQVNFRSTAGVVNWVNDAF
KQILPGQDDKETGAVSYSDSTAFSNDNNLAVSTHWALNQSPAEEAQQILAVIQQRLAELA
AEQKASDVKAKIKKIAILGRTRSSLMGIAQLLKQQNIGFRAVDLENLADRQEVQDVLALS
RALLHLADKAAWIALLRSPLIGLDLKDIYLLIGEQPFNTVWHALHYCECKAKNRDDEEQK
NCRKPCCVSSFEKLSDVGETRFSRALPILENAVKRLGSLSFADLVRETWLQLDGPQSVEN
RLALENVDVFCQTLANSETEILDIKQLEKQMETLFARPDSDPDSQRIELMTMHKSKGLEF
DTVILPGLGKKPRSDDAELVSWFQFLAQNGEEQLVIAPLDRKGQATSSLRTLLKGFEAEK
QRYELGRLLYVAATRAKNRLHLFAQVNYKPTEKQIEKDDCKVTPTKDSLLESMWPYVQKE
FDELAKAYDPQDSGGEETEMPWPKVSRLPMQRQGFASFSPPPLFTVPSPVAKAKPGQITL
DNEFDQSATDNGQSNPPGLVFSQQNALLNTTVGNLVHAIFEQIVLDGIETWDESKLQERW
PIYELWLLQQGLPESELPEALSRVKQSIFNGLNNSTVRWALQNTLAHSAVEYPLTSIEEE
GVANHIVDRTFVDDEGVRWIVDYKTSVSDDKDSRTFIQRQVEKYQPQLQRYGQLFEQIES
RPQKWVLYFSYLDIWHELN
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccaacgatgcaacaaggttccctgttctcaatagctgattcagcaaaccaacca
ggcctggtagaaagtcatgcaggcatgaataaccattttttagagcaacacttcggactg
caagcggatgagactttacccgatggtttggctcgttttcaaggtgtgtatccgcaccac
tctttcattgtgcaagcccctgcgggttcgggaaaaacctccttattggcgcaacgtttc
ttggcattgttgtcacaagtgaactcgcctgagcagattgtggcgatgacctttaccaaa
aaagcggctgctgagatgcgtgagcgtattgtcgaagctttgatgttgggggaaaaaccg
ctcgcggataatgccaatttggtggaaagcaacacctggaaattggctcgcaaagcgtta
caacgtgaccaggaacaggggtggtcattgttgaaaaacccgaaccgtttgcgtatcaaa
accatcgacggtttaaacagctatttggtggggcagatgccgttgctctccaaaatgggc
ggccagtcgcagctgctgcaagatgcgaccccggcctatcaagaggcggtgcgccaagtg
cttaaaatgccacaacttgaggagccggtcggtcgtctgttgcgcttggtgaatggccgt
tttggtcgtgccgaatcgttattgatgaatatgctcgccaaacgtgatcaatggatgcgt
accttgatccaatatcaaggcgaagccgcgcgtgaggtgctggaacaggcgctgcaagag
atcgtcaacaaggtgttggcagaacagcttggcgcactctattatctgaaaccagctttt
gaagaagtttgcagcatcgccgaatatgcggtgcaaaacgaccagccgcagttagccata
ttatgtggcgcctggccgattgccgaagacaccagtgaaaccgaaaaatggcgggtgttg
gctgactggttattaaccaatcaaaacgaagtgcgtaaaacggtgactaaaaacaacggt
tttccggcaggaaaaggtgaggctaaagagcagaaagaccgatttttagccgtgttggaa
caagtaagagttgccgccgccagtcattccgaggtgttaccaggcctggtgactttgaaa
aatttgccgcaaccggattacaccgatgaacaatggcaagatctgcagtggttgattcag
ctgttaaccctcagtgccggctttttaaaactggtattccagcaaaccgggcaagccgat
tatattgaaatagcgcaagcggccagccaggcgttgggtagcgagttggagccgaccgat
ttggcgcaacaactcgactaccaaatccaacatctattggtggatgagtttcaagatacc
agtagcgaacagtacaagttgttgaaacagctgattgccggctggcaacccgatgacggc
cgcacgctgtttttggtgggagatcctatgcagtctatctaccgctttcgtgaagccgag
gtgggcaatttcttagaggcttggcaaggtcagttgggctcggtgcgtttgaagcagctc
aatctacaggtcaacttccgctctaccgccggagtggtcaattgggttaatgatgccttt
aaacagatattgccaggccaagatgacaaagagactggggcggtaagttacagcgattct
acggcgttctctaacgataataatctggcggtcagcacgcactgggctttgaatcaatcg
ccggcagaagaggcgcaacaaatcctggcggtgattcaacaacgtttggcagagctggcg
gccgagcaaaaagcatccgatgttaaggctaaaatcaaaaaaatcgccatcttggggcgc
acccgttccagtttgatggggattgcccaactgttgaaacagcagaacatcggctttaga
gcggtggatttggaaaacctggctgaccgccaagaggtgcaagatgttttggcgttgagt
cgtgccttactgcatttggccgacaaagcggcgtggattgctttgctgcgttcgcctttg
attggtttggatttaaaggatatttatcttctgattggtgaacagccttttaatacggtt
tggcatgcgttgcattattgtgaatgtaaggccaaaaatagggatgacgaggaacaaaaa
aactgccggaagccttgttgtgtttccagtttcgagaagctttcagatgttggggaaacc
cgtttctctagagccttgccgattctcgaaaatgcggtaaaaagattgggtagcttgtcg
tttgccgatttggttcgcgaaacctggttgcagttggatggcccgcaaagtgttgaaaac
cggttggcattggaaaacgtcgatgtgttttgtcaaacattggccaatagcgaaactgaa
attctcgatatcaaacagctcgaaaaacagatggaaaccctatttgcacgccccgacagc
gacccggacagccaacgtatcgagttgatgaccatgcacaaatccaaaggtttggaattt
gatacggtcatcctacctggcctgggtaaaaaaccgcgtagtgatgacgccgaattggtt
tcctggtttcaatttctagcacaaaacggtgaagagcaattggtgattgcaccgcttgac
cgtaaaggtcaggcgacctcgagcttacgcactttactcaaagggttcgaggcggaaaag
cagcgctatgaattgggacggttgctgtatgtggcggctacacgagccaagaatcggttg
catttgtttgcccaggtaaactataagccgactgaaaaacagattgaaaaggatgattgt
aaagtcacgccaaccaaagacagcctgttggaaagcatgtggccttacgtacaaaaagag
tttgatgaactggctaaggcttatgacccgcaggatagtggcggcgaagaaaccgaaatg
ccatggcctaaagtcagccgcttgccaatgcaacgccaaggctttgccagctttagtcct
ccgcctttgttcactgtgccgtcaccggttgcaaaagccaaaccaggccaaataaccctt
gataatgagtttgatcaatcagcaacggacaacgggcaatcaaaccctccaggcctggtg
ttcagtcaacaaaacgccttgctgaatacgactgtaggtaacttggttcacgccattttt
gaacagatagtgcttgatggtattgaaacttgggacgagtccaaactgcaagagcgatgg
ccgatttatgaactttggttgctccaacaaggtttgccggaaagcgaattgccagaagcg
ttaagtcgtgtgaaacagtctattttcaatggcctaaataattcaacagtgcgttgggcg
ttgcaaaacaccttggcgcattcagcggtcgaatatccgctgacttcgattgaagaagag
ggggttgccaaccacatcgttgaccgtacgtttgtggatgacgaaggggttcgttggatt
gtggattacaaaaccagtgtgagtgacgataaagacagccgcacatttatacaaaggcag
gttgagaaatatcagccgcagttgcaaagatacggccaattatttgaacaaattgaaagc
cgcccacaaaaatgggtgctctatttcagttatttagatatttggcatgagttaaattaa
DBGET
integrated database retrieval system
