Thioploca ingrica: THII_2578
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Entry
THII_2578 CDS
T03616
Name
(GenBank) ribosomal RNA small subunit methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
tig
Thioploca ingrica
Brite
KEGG Orthology (KO) [BR:
tig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tig03009
]
THII_2578
Enzymes [BR:
tig01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
THII_2578
Ribosome biogenesis [BR:
tig03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
THII_2578
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_25
FtsJ
Methyltransf_31
Motif
Other DBs
NCBI-ProteinID:
BAP56875
UniProt:
A0A090ANE6
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Position
3112252..3113616
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AA seq
454 aa
AA seq
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MDARSAATQILTQVIGERRSLSHCLETQLPLLKDSRERALAQELCYGVLRWLPRLQALLN
CLLHKPLRTKDDDIQVLLLIGLYQHLYLQIPPYAATAATVEVTRTLKKDWASGLVNAILR
HFQRQREQLLEQIDVNLSVKFAHPPWLLERLQTSWPHHWESLLQANNSHPPVTLRVNARC
LSREAYLAHLQQANIVAELTPYTDYGVTIQQLPVTLDLEEKLNLLKFVPDKMGNWITHLP
GFNQGWVSVQDGAAQLAAPLLDVPVGARVLDACAAPGGKTAHLLEHYNNIGTLFALDNQS
ARIKKLEDTLRRLQLTATIRCADATQPHTWWDGNPFERILLDVPCSASGVIRRHPDIKYL
RQPSDITMLSDQQQRLLEALWPLLKPGGKLLYVTCSVFAEENELQIEKFLTTQADAYENR
LVAPWGHALSRGRQILPGENNADGFYYACLTKTT
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcgtagcgcagcaacccaaatattaactcaagtgattggcgaacgacgttct
ttatctcattgtttggaaacgcaacttcccttattaaaggattctcgtgaacgagcattg
gcccaagaactgtgttatggcgtgttacgttggcttccccgactgcaggcattattgaac
tgcttattgcataaaccacttcggactaaagatgatgatattcaagttttattattgata
ggcttatatcaacacctttatttacagattccgccttatgccgcgacggctgcaacagtc
gaggtaacccgtactttgaaaaaagactgggctagtggcttagttaatgccatattgcgc
cattttcagcgacaacgggaacaattacttgagcaaatagatgttaatttgagtgtaaaa
ttcgcacatccaccttggttactcgaacgtctacaaacaagttggccacatcattgggaa
agcttattgcaggctaataatagccatccgccggtaaccttacgagtgaatgcacgttgt
ttatcgcgggaagcttatttagcacatttacagcaagccaatatcgtagcggaattaact
ccttacactgattatggggttaccattcagcaactgccagtgactttagatttagaagaa
aagcttaacctgctaaaattcgtacccgataaaatgggaaactggattactcatttaccg
ggttttaaccaaggttgggtatccgtacaagatggtgctgcacaattagccgccccttta
ctggatgtccccgttggcgcacgagtattggatgcttgtgcggcacccggtggtaaaact
gcccatctattagaacactataacaatataggtaccttattcgctttagataatcagtcc
gcgagaatcaagaaattagaagatactttgcggcggttacagttaactgcaactatccgt
tgtgctgatgcgacccaacctcacacttggtgggatggtaacccctttgagcgaatttta
ctggatgtcccttgttctgccagtggtgttattcgccgccatcctgacatcaaatattta
cgtcagcctagcgatatcactatgttaagcgatcaacaacaacgtttgctcgaagcatta
tggcctttacttaaacctggaggaaaattgttgtacgtgacgtgttcggtttttgctgag
gaaaatgagttacaaattgaaaaatttttaacgacacaagcggatgcctatgaaaaccga
ttagttgcgccatggggtcatgccttatcgagaggcagacaaattctacccggtgaaaat
aatgccgatggtttttattatgcttgtttaactaaaaccacttga
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