Thiomonas intermedia: Tint_1788
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Entry
Tint_1788 CDS
T01227
Name
(GenBank) chaperone protein DnaK
KO
K04043
molecular chaperone DnaK
Organism
tin
Thiomonas intermedia
Pathway
tin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Tint_1788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tin03019
]
Tint_1788
03110 Chaperones and folding catalysts [BR:
tin03110
]
Tint_1788
03029 Mitochondrial biogenesis [BR:
tin03029
]
Tint_1788
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tin04147
]
Tint_1788
Messenger RNA biogenesis [BR:
tin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Tint_1788
Chaperones and folding catalysts [BR:
tin03110
]
Heat shock proteins
HSP70 / DNAK
Tint_1788
Mitochondrial biogenesis [BR:
tin03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
Tint_1788
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
Tint_1788
Exosome [BR:
tin04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Tint_1788
Exosomal proteins of breast cancer cells
Tint_1788
Exosomal proteins of colorectal cancer cells
Tint_1788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Motif
Other DBs
NCBI-ProteinID:
ADG31158
UniProt:
D5X212
LinkDB
All DBs
Position
1917820..1919757
Genome browser
AA seq
645 aa
AA seq
DB search
MAKIIGIDLGTTNSCVAVMEGNTPKVIENSEGARTTPSIVAYMEDGEILVGASAKRQSVT
NPKNTLFAVKRLIGRKFTEKEVQKDIDLMPYSIVKADNGDAWVEVRGKKLAPPQISAEVL
RKMKKTAEDYLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAFG
LDKHGKGDRKIAVYDLGGGTFDVSIIEIADVEGEKQFEVLSTNGDTFLGGEDFDQRIIDY
IIAEFKKEQGVDLSRDVLALQRLKDAAEKAKIELSSSTQTEINLPYVTADASGPKHLNLK
LTRAKLESLVEELIERTIAPCRTAITDAGVKVGDIDDVILVGGMTRMPKVQDKVKEFFGK
EPRKDVNPDEAVAVGAAIQGSVLAGDRKDVLLLDVTPLSLGIETMGGVMTKMITKNTTVP
TKHAQVYSTADDNQPAVTIKVFQGEREMAAGNKLLGEFNLEGIPPAPRGVPQIEVTFDID
ANGILHVSAKDKGTGKENKITIKANSGLSEEEVQRMVRDAEMNAEEDHKKRELVDARNQA
DAAVHSVRKSLSEYGDKIDAGEKSAIEDALKAAEEAIKSEDKAEIEAKTSALLAASQKLG
EKMYASQAAEPGAAGGASSGSGGGQAAGDDTVVDAEFKEVKDGKA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaatcatcggtatcgacctgggcaccaccaattcttgcgtggcggtcatggag
ggcaatacgcccaaggtcattgagaacagcgaaggcgcacgcaccacgccatccatcgtc
gcctatatggaagacggcgaaattctggtgggggcttcagccaagcgccaatcggtcacc
aaccccaagaacacgctgttcgccgtcaagcgactgatcgggcgtaagttcaccgaaaaa
gaggtgcagaaagacatcgacctgatgccctacagcatcgtcaaggccgacaacggcgac
gcctgggtggaagtgcgcggcaaaaagctcgcgccgccgcagatcagcgccgaagtgctg
cgtaagatgaaaaagacggcggaagactatctgggtgaagaagtcaccgaggcggtgatc
accgtgcccgcctacttcaacgacagccagcgccaggccactaaggatgctggccgcatt
gccggtctggaagtcaagcgcatcatcaacgagcccactgccgcagccctggccttcggt
ctggacaagcacggcaagggcgaccgcaagatcgcggtctatgacctgggcggcggcacc
tttgacgtgtccatcattgagattgccgacgtcgagggcgaaaagcagttcgaggtgctc
tccaccaacggtgacactttcctgggcggtgaagacttcgaccaacgcatcatcgactac
atcatcgccgagttcaagaaggagcaaggcgtcgatctgagcagggacgtgctcgcgctg
cagcgcctgaaagacgcggccgagaaggccaagatcgaactctccagctccacccagacc
gagatcaacctgccctacgtcacggccgatgcctccggtccgaagcacctgaacctcaag
ctcacccgcgccaagttggagtcgctggttgaagagctgatcgagcgcaccattgcgccc
tgccgcacggccatcaccgatgccggtgtgaaggtgggcgacatcgacgacgtcatcctt
gtcggcggcatgacccgtatgcccaaggtgcaggacaaggtgaaagaattcttcggcaag
gagccccgcaaggacgtgaaccccgacgaggccgtggccgtaggcgcggccattcagggt
tcggtgctggcaggcgaccgcaaggacgtgctgctgctcgacgtcaccccgctgtctctg
ggcatcgagaccatgggcggcgtgatgaccaagatgatcaccaagaacaccaccgtgccg
accaagcatgcgcaggtctattccaccgcggatgacaaccagcctgcggtgaccatcaag
gtgttccagggcgagcgcgaaatggcagcgggcaacaaactgctgggcgagttcaacctc
gaaggcattccgcccgctccccgcggcgtgccgcagatcgaagtgaccttcgacatcgac
gccaacggcattctgcacgtcagcgccaaggacaagggcaccggcaaggagaacaagatc
accatcaaggccaattccggcttgagtgaagaggaagtgcagcgcatggtgcgcgatgcc
gaaatgaatgcggaagaagaccacaagaagcgcgaactggtcgatgcccgtaaccaggcc
gacgccgccgtgcattctgtgcgcaaatcgctgagtgagtatggcgacaagatcgatgcg
ggcgagaaatccgccatcgaagacgcgctgaaagctgccgaagaagcgatcaagtcggag
gacaaggccgagatcgaggccaaaaccagcgccctgctcgccgccagccagaaactgggc
gaaaagatgtacgccagccaagccgctgaacccggcgcggccggtggcgcctcatccggt
agcggtggaggccaggctgcaggcgacgacaccgtggtcgatgccgagttcaaggaagta
aaggacggcaaggcctga
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