Thiomonas intermedia: Tint_2177
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Entry
Tint_2177 CDS
T01227
Name
(GenBank) Carbohydrate-selective porin OprB
KO
K07267
porin
Organism
tin
Thiomonas intermedia
Brite
KEGG Orthology (KO) [BR:
tin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tin02000
]
Tint_2177
Transporters [BR:
tin02000
]
Other transporters
Pores ion channels [TC:
1
]
Tint_2177
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
ADG31528
UniProt:
D5X3H0
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All DBs
Position
2324382..2325680
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AA seq
432 aa
AA seq
DB search
MMLSTLFKPTCLCAALLLMSSAAAQAAQSTHTPGQYDLGNGLTFSANYTGEAAANTTGGL
RQGSAYAGQLFLGADLDLQKMLGWNATSVHIAVTQRHGQSLSNEAIGNNTSVQEIYGTQN
LHLAYFTVEKKFFGGRLEIQGGRTVANIDFLNSPLYCNFQSNSACGNPTFVFKNSNFTYF
PASSWGGYAKGWVTDKFYAKVGAYEVNPNDKRPNDHGIDWSTKDATGVVVPWAMGYATTF
ANDTHPRDYEIGGWFDRSKYTDPLLDANGDYAVLTGQPYRTDRNRSGAYVRFSQMVWRPD
MNSQRGLTLFGVAMTNLTGRVNESSFLELGAVMQGPFPGREQDTLGFVINQQRFSSLALQ
NIRVARASVGASTDIPGSETMMELAYGYQLSPGIRLSPNLQYILHPDQQAEPFRTSNIPN
AFVIGLKFTVAL
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgatgctttccactctttttaagcccacctgcctgtgcgctgcactcttgctgatgagc
agcgccgcagcgcaggccgctcagtccacacacacaccgggccagtatgacctgggcaat
ggcctgaccttctccgccaattacaccggcgaagccgcagccaacaccaccggcggcctg
cggcagggctcagcctacgcaggccaactcttcctgggcgcggatctggatttgcagaag
atgctggggtggaatgccaccagcgtgcacatcgccgtcacgcaacgccacggccagagc
ttgtcaaacgaggcgattggcaacaatacctcggtgcaggagatttacgggacgcaaaat
ctgcacctggcctacttcaccgttgagaaaaagtttttcggtgggcggctggaaattcag
ggcgggcggacggtggcgaatatcgacttcctcaactccccgctgtattgcaacttccag
agcaactcggcctgcggcaacccaactttcgttttcaagaacagcaacttcacttacttt
ccggcgtcgagttggggcggctacgccaagggctgggtgaccgacaagttctacgccaaa
gttggagcgtacgaagtcaatccgaacgacaagcgccccaatgatcatggcatcgactgg
agcaccaaggatgccactggcgtcgtcgtgccctgggcgatgggctatgccacgaccttc
gccaacgacacccatccgcgtgactatgagatcggcggctggtttgatcgctccaagtac
accgatcccctactcgatgccaatggcgactatgccgtcctcacgggacagccctaccgc
accgaccgcaaccgctccggcgcctatgtgcggttcagccagatggtgtggcgccctgac
atgaactcccaacgcggcctgaccctttttggcgtggcaatgaccaatctcacaggccgg
gtcaatgaatccagctttctggaactgggcgcggtcatgcaaggtcccttccccggtcgt
gaacaagacacacttggctttgtcatcaaccagcagcgattctccagcctggccctgcag
aatattcgggtggcgcgcgcctcggttggcgcaagcaccgatataccggggagcgagacc
atgatggaactggcctatggctatcaactcagcccaggaatccgactctcccccaacctg
cagtacatcctccatcccgatcagcaggccgagccctttcgcaccagcaacattcccaac
gcctttgtgatcgggctgaaattcacggtggcactttga
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