Tissierella sp. Yu-01: P3962_04125
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Entry
P3962_04125 CDS
T08969
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tis
Tissierella sp. Yu-01
Pathway
tis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P3962_04125 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tis03019
]
P3962_04125 (pnp)
03016 Transfer RNA biogenesis [BR:
tis03016
]
P3962_04125 (pnp)
Enzymes [BR:
tis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
P3962_04125 (pnp)
Messenger RNA biogenesis [BR:
tis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
P3962_04125 (pnp)
Transfer RNA biogenesis [BR:
tis03016
]
Prokaryotic type
tRNA degradation factors
P3962_04125 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_2
C-C_Bond_Lyase
PCB_OB
DUF1773
Motif
Other DBs
NCBI-ProteinID:
WFA09756
LinkDB
All DBs
Position
complement(792130..794226)
Genome browser
AA seq
698 aa
AA seq
DB search
MESKFIYNLAGRDIIVTIGKVAEQANGSCLVQYGDTVVLATATASKQPREGIDFFPLSVD
YEEKLYSVGKIPGGFIKREGRPSEKAILTSRLIDRPIRPLFPDGYRNDVQVITTVLSVDQ
DSSPEIAAMIGSSIALSISDIPFSGPTGAVHIGLVDGEFIVNPKADEREESEINLTVSGT
KDAIMMVEAGANEVTEHTMLEAILTAHEEIKKICDFINDIVKECGKEKTEFKVFEPVPEI
ASEIKEYGTERLIAAINTVEKQEREEKIAEVSDEITNVFLEKYPEAEKDIAETIENIIKV
EVRRLILEEGKRPDNRKPDEIRKITTDVGLLPRTHGSGLFTRGQTQVLTIATLGAKSDVQ
IIDGLGDDESKRYMHHYNFPPYSVGEARPLRGPGRREIGHGALAERALEPVIPSVDVFPY
TIRLVSEVLSSNGSSSQASVCGSTLALLDAGVPIKAPVAGIAMGLIKEKDKVAILSDIQG
MEDHLGDMDFKVAGTKDGITAIQMDIKIAGIDRDILVEALERARQGRLFILNKMVETISE
PREELSPYAPKIYTMQVNPDKIRDIIGPGGKVINKIIDETGVKIDIDDEGKILIATIDSA
GGQRAVEMINNIVKEIEVGEIYLGKVTRITNFGAFVDVFNGKEGLVHISQLANERVAKVE
DVVSIGDQIMVKVIEIDNQGRINLSRKACLPEEPKTEE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcaaattcatatataatctagctggaagagacataatagttacaattggaaaa
gttgcggagcaagccaatggttcttgtttagtgcaatatggagatacagtagtactagct
acagcaactgcttcaaaacaaccaagagaagggattgatttcttcccattaagtgtagat
tatgaagaaaagttatattcagtaggtaaaattccagggggttttataaaaagagaagga
agacctagtgaaaaagcaatattaacttcaagattaatagatagacctattagaccatta
tttcctgatgggtatagaaacgatgtacaagttataacaactgtactatctgttgatcaa
gatagtagtcctgaaatagctgcaatgataggttcatctattgcactatccatatcagac
ataccatttagtggtccaactggtgccgttcatattggtttagttgatggagagtttata
gtaaatccaaaagcagatgaaagagaagaatctgaaataaacttaacagtatcaggtact
aaggatgccattatgatggttgaggcaggcgctaatgaagttactgagcatactatgtta
gaagcaatattaacagctcatgaagaaataaaaaagatatgtgactttataaatgatatt
gtaaaagagtgtggtaaggaaaaaactgaatttaaagtatttgagccagttcctgagatt
gcaagtgagattaaggaatatggaacggaaagattaatagcagcaataaatacagtagag
aaacaagaaagagaagaaaaaatagctgaagtttctgatgaaattacaaatgtattttta
gagaaatatcctgaagctgaaaaggatattgcagaaactatagaaaatataataaaagtt
gaagttagacgtttaatattagaagaaggaaaaagacctgataatagaaaacctgatgaa
ataaggaaaataactactgatgtaggacttcttcctcgaactcatggatctggtttattt
acaagaggtcaaactcaggtattgactattgcaacacttggagcaaagagtgatgtgcaa
ataattgatggactaggtgatgatgagtcaaagagatacatgcatcattataatttccca
ccatattcagtaggtgaagctagaccattaagagggccaggtagaagagaaattggtcat
ggtgctttagctgaacgtgctttagaaccagttattccatcagttgatgttttcccatat
actattagattggtttcagaagttttaagttcaaatggttcctcatcacaagcaagtgtt
tgtggaagtactttggcactattagatgcaggtgttccaataaaagctcctgttgcaggt
atagctatgggacttataaaagaaaaagacaaagttgctatactttcagacattcaagga
atggaagaccatttaggagacatggattttaaagttgcaggaacaaaagacggaattact
gctatacaaatggatattaaaattgctggaatagatagagatattctggtagaagctttg
gaaagagcaagacaaggtagattatttattttaaataaaatggtagaaactatatcagaa
cctagagaagaactatcaccatatgctccgaaaatctatactatgcaagtaaaccctgac
aagattagagatataattggaccaggtggtaaagtcatcaataagataattgacgaaact
ggcgtaaagattgacattgatgatgaaggtaaaattcttatagcaactatagattcagca
ggtggtcaaagagctgttgaaatgattaataatatagtaaaggaaatcgaagttggggag
atctatttaggaaaagtaactagaattactaactttggtgcctttgttgatgtattcaat
ggaaaagaaggacttgttcatatatcacagctagctaatgaaagagtagctaaagttgaa
gatgtagtttccataggagatcaaataatggtaaaggtaattgaaattgacaatcaaggt
agaataaatctatcaaggaaagcttgtttacctgaagaaccaaaaactgaagaataa
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