Thermoanaerobacter italicus: Thit_0121
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Entry
Thit_0121 CDS
T01178
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
tit
Thermoanaerobacter italicus
Pathway
tit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Thit_0121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tit03021
]
Thit_0121
03019 Messenger RNA biogenesis [BR:
tit03019
]
Thit_0121
Transcription machinery [BR:
tit03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Thit_0121
Messenger RNA biogenesis [BR:
tit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Thit_0121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
ATPase_2
AAA_22
AAA_14
AAA_25
Spore_III_AA
NACHT
AAA
Motif
Other DBs
NCBI-ProteinID:
ADD01449
UniProt:
D3T5E8
LinkDB
All DBs
Position
138513..140039
Genome browser
AA seq
508 aa
AA seq
DB search
MDFDINTLGNLSLMELREIAKKLGIKSITKYRKQELKEKILEKANQANEKNLVQKDNKKE
EGLNERQTQKLHESAAEKNTDGTLNYDSNVSRNGHVKSISAENAANGLQAQTISAKDILP
IVKELSDPLKELIQTQGDVVAEGILDILPDGYGFLRVENFVQGPKDIYISQSQIRRFGLK
VGDKVRGITRIPREGEKYSAILYVESINGEDPENAKKRIPFDELTPIFPNEKLRLETSPT
EFSMRLVDIIAPIGKGQRGMIVAPPKAGKTTLLKQIANSISHNHPEVILIVLLIDERPEE
VTDMKRSIKGEVVYSTFDEPPEHHIKVAEMVLEHAKRLVEYKKDVVILLDSITRLARAYN
LVTPPSGRTLSGGIDPSALHPPKRFFGAARNIEEGGSLTILATALIETGSRMDDVIFEEF
KGTGNMELHLDRKLQERRIFPAIDIYKSGTRKEELLLTKEELEAMWILRKAMSNLPATEV
TEMLIEKLIRTKSNAEFINMIRAQLYKS
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
ttggattttgatattaatactttgggaaatttaagtttgatggaactaagagaaatagca
aagaagttaggtattaaaagtattacgaaatacagaaaacaagagctaaaagaaaaaatt
ttagaaaaagctaatcaagcaaatgaaaaaaatttagttcaaaaggataacaaaaaagaa
gaaggtttaaatgaaaggcaaactcaaaagttacacgaaagtgcagcagagaaaaataca
gatggcactttaaattacgattctaatgtatcgagaaatggccatgtaaaatctattagt
gctgaaaatgccgcaaatggcttacaagctcaaacaatttctgcaaaagatattttgcca
attgttaaagaactttctgaccctttaaaagaacttatacagacgcaaggtgatgtagtg
gcagaaggcattcttgatattttgccagatggttacggatttttaagagttgaaaacttt
gttcagggacctaaagatatatatatttctcaatcccaaataagacgttttggcttaaaa
gttggtgacaaagtacgagggattacaaggattcctcgagaaggggaaaagtattctgcg
attctttatgtggaatctataaatggtgaagatcccgaaaatgccaagaaaaggattcct
tttgatgaattgactcctatttttcctaatgaaaaactgagattagaaacatcccctaca
gaattttctatgagattggtagatattattgctcctataggtaaagggcaaagaggtatg
attgttgcaccgccaaaagcaggaaaaacaactttacttaagcaaattgccaatagcatt
tcacataaccatccagaagttattctcatagtgcttttaattgatgaacgacctgaagaa
gtgactgacatgaaacgctctataaaaggagaagtagtatattctacttttgatgaaccg
ccagaacatcatatcaaagtggctgaaatggtattagaacatgctaaaagacttgtagag
tataaaaaggatgtggtgattcttttagatagtattactaggttggcgagagcttataat
cttgttacacctccttcaggaagaactctttctggtggcattgacccttctgcattacat
cctccgaaaagatttttcggagcagccaggaatatagaagaaggtgggagtttaactatc
cttgctactgctttgattgaaacgggaagtcgtatggatgatgttatatttgaagaattt
aagggaacaggtaatatggaacttcatcttgacagaaaattacaggaaagaagaatattc
cctgctattgatatatacaaatcgggtacaagaaaggaagaattgctgcttactaaagaa
gaattggaggccatgtggatattaagaaaagctatgtcgaatttacctgctacagaggtt
acagagatgttaattgaaaaattaatacgaactaaatctaatgcagaatttataaatatg
ataagagcacaattatataaatcttga
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