Tissierella sp. MB52-C2: RBU61_03390
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Entry
RBU61_03390 CDS
T09678
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tiz
Tissierella sp. MB52-C2
Pathway
tiz03420
Nucleotide excision repair
tiz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RBU61_03390
03430 Mismatch repair
RBU61_03390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tiz03400
]
RBU61_03390
Enzymes [BR:
tiz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RBU61_03390
DNA repair and recombination proteins [BR:
tiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RBU61_03390
MMR (mismatch excision repair)
Other MMR factors
RBU61_03390
BRITE hierarchy
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
Viral_helicase1
ResIII
AAA_30
HHA
Rho_RNA_bind
Motif
Other DBs
NCBI-ProteinID:
WMM25723
UniProt:
A0AA51R9A3
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All DBs
Position
complement(668512..670377)
Genome browser
AA seq
621 aa
AA seq
DB search
MNLSIEQQNAVEHVRGPALILAVPGAGKTTVLIHRTANLILNHRISPEKILSITFSKASA
RDMKSRFSQLFGDISSIPIEFSTIHSFCFSLIREYAYTNRIKYTLVEGEKERLNKFNLIK
KIYLDINQQYITEEKLEALLNATGYIKNMMITAEEFLKNNKIDIENFKTIYNTYEKYKRD
NNLIDFDDMLTLSLEILRENKHILEKYRNKYDFLQVDEGQDTSKIQMEIIKLISSPKNNL
FIVADDDQSIYGFRGAYPKGLLNFNNIYPKGKVFFMEDNYRSSKNIVSVCNEFIRRNKLR
YNKNIRTSNKFIEPISVIKVNSISEQYKYIIDDLKDRELSKCCILYRNNLSSVGLIEFFE
RYQIPFYIRDVKVKFFSHWLIQDVINFIIFSNDTSNMAVYESIYYKKKGYISKKQINYAK
TLNYNLSVFDRIMDFPGLSNFYRSTLMDLKLDFKKLSKLSPPEAIRFIEYDLEYEKYLKE
NSMRFGYTYDSLKTILHYLKLIANNTGSLNDLLNRLKYLDSLCRNSSYTKNAVTLSTVHS
AKGLEFDRVYMIDLVDGDFPSSSSVDASEKGKYELIEEERRLFYVGMSRAKHHLSLITPN
RIGDKSVSPSRFLLELQNNKN
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaagtatagaacaacaaaatgcggtggagcatgtaagaggtcctgctttaata
ttagcagtacctggtgcaggtaagactacagttctaatacatagaactgctaatctaatt
ttaaatcatagaataagtccagaaaaaatcttgtctataacctttagcaaagcttctgct
agagatatgaagtcaagatttagccaattatttggggacatatcttctattcctattgag
ttttccacaattcatagtttctgttttagtctaattagagaatatgcttatacaaataga
attaaatatactttagttgagggtgaaaaagagcggctaaataaatttaatttaataaaa
aaaatatatcttgatataaatcaacaatatatcactgaggaaaaattagaggctttgcta
aatgccacaggatatattaaaaacatgatgattacagcagaagaatttttaaaaaataac
aaaattgatattgagaattttaaaactatatataatacatatgaaaagtataaaagagac
aataacctaatcgattttgatgatatgctgaccctatctctagaaattcttagagaaaac
aagcatatattagaaaaatatcgtaataaatatgactttttgcaagtagatgaaggacaa
gatacttcaaaaattcaaatggaaataataaagttaatctcaagtcctaagaacaattta
ttcatagtagcagatgatgatcaatctatatatggatttagaggtgcatatccaaaggga
ttactaaattttaataatatctatcctaaaggaaaggtgttttttatggaagacaattat
cgttcctcaaaaaatatcgtctcagtatgtaatgaattcattagaagaaacaaattaaga
tataataaaaatattagaacaagcaataaatttattgaacctattagcgtaataaaagtt
aattccattagcgaacaatataaatatataatagatgatctaaaagacagggagctgtct
aaatgttgtatactctatagaaataatctatcctccgttggtcttatagaattttttgaa
agatatcagattccattttatatccgtgatgttaaagttaaattctttagccattggctt
atacaggatgtaataaactttattatattttccaatgatacaagtaatatggctgtatat
gaaagtatttattataaaaagaaaggatatatatcaaagaaacaaattaactatgcaaag
actcttaactataatctttcagtattcgatagaataatggattttcctggtttatcaaac
ttctatagatctactctcatggacttaaaattagattttaaaaaactttcaaaattaagt
ccacctgaggcaattagatttatagagtatgatttagagtatgaaaagtatcttaaggaa
aattccatgagatttggatatacttatgactctttaaaaactatattacattatttaaaa
ctcatagccaataacactggaagtctaaatgatttattaaataggctaaaatatttagat
agtctatgtagaaactcttcatatacaaaaaatgcagtaactctatctactgttcactct
gctaagggtttagaatttgatagagtatatatgatagatttagtagatggtgattttcca
tcatcttcaagtgttgatgcctctgaaaagggaaagtatgaattaatagaagaagaaaga
agattattttatgtaggaatgagtagagcaaaacatcatctatctctaattactcccaat
cgtataggagataagtctgtttctccatcacgatttttgttagaattgcaaaataacaaa
aattaa
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