Thiothrix lacustris: RCF98_08545
Help
Entry
RCF98_08545 CDS
T09396
Symbol
btuB
Name
(GenBank) TonB-dependent vitamin B12 receptor
KO
K16092
vitamin B12 transporter
Organism
tlc
Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tlc02000
]
RCF98_08545 (btuB)
Transporters [BR:
tlc02000
]
Other transporters
Pores ion channels [TC:
1
]
RCF98_08545 (btuB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
WML92376
LinkDB
All DBs
Position
complement(1773103..1774944)
Genome browser
AA seq
613 aa
AA seq
DB search
MKSFPLAAVFGTAAVCLLASPLVLAEDAAPTSLDDIVVTAGRKAQTVDATLAPVSIITRT
DIEQYQASSLPDVLRRLPGITLSNSGGVGKTTSVFIRGTHSSHVLVLVDGIKVGSATTGS
VAFEDLPLDQVERIEVVRGPRSSLYGSEAIGGVIQIFTRKGGKGFQPEVSVGIGSHNTQQ
AHANLAGGDGTTWYNLNAGKDETDGINVTANNREPDLDGYKRDSVTLSAGHRFADGTTLE
ASALHATGENHFDGSFNNESHVTQQVLNTKLQHLLNDKVLLTAQLGQARDDSDNYLNGVP
LAAYRTYNTQRNTGTLQADMAVGAKGTATLGLDQQQDKVISDSTYDRTSRDNTGVFANYQ
TDIGATRLDVSARHDKNEQFGSNNTGNIAVGRDLNNGMRVTAAYGTAFKAPTFNNLYYPF
SGDPNLQPETSQSVELGVSGKLAGDKVQWSANAFSNEIDDLISYPPPDYAVSQTDKARIR
GLELSATTQVAGWDINANATVQQPENRSGTNTGKTLIYRPKQFANVDVDREMGKFRVGGS
VHAESQRYTDDANTESKKLAGYGTLDLRADYRVSKDWTVGAKVGNVLNKDYQTSNGYNQD
GVNGLVTVKYAPK
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcattccctctcgccgcagtgtttggcactgctgctgtttgcctgttggcatcc
ccgctggtgttggcagaagacgccgcgcctacttcccttgatgacatcgtggttactgct
ggccgcaaagcacagacggtagatgcgacccttgcccctgtcagtattattacccgcacc
gatattgaacaatatcaggcgagcagcctgcctgatgtcttgcggcgtttaccgggcatt
accctcagtaatagcggtggggttggtaaaacaacgtcggtgtttattcgtggcacccat
tccagtcatgtattggtcttggttgatggtattaaagtcggttccgccactaccggcagc
gtagcgtttgaagacctgccattggatcaagtggaacgcatcgaagtcgtgcgtggccca
cgttccagcctgtacggctcggaagcgattggcggcgtgatccagattttcactcgcaaa
ggcggcaaaggttttcagccagaagtcagtgtaggcattggtagccacaatacccaacaa
gcccatgcaaaccttgcgggcggtgatggcacgacctggtacaacctgaatgcaggcaag
gatgaaacggatggcatcaatgtcaccgctaataatcgcgaaccggatttggatggttat
aaacgtgacagtgttaccttaagtgccggacaccgttttgctgatggcacgacgctggaa
gcgtctgctttgcacgccacgggtgaaaaccatttcgatggcagcttcaataatgagtca
catgttacccagcaggtgctgaataccaagttacagcatttactgaatgacaaggtgcta
ctgactgcgcaattggggcaggcacgggacgattccgacaattacctcaatggtgttccg
cttgccgcttaccgcacctacaatacccagcgtaatacgggcacacttcaggccgatatg
gctgtgggggcgaagggaacggcaacactggggcttgatcagcaacaggataaggtgatc
agtgacagtacttatgatcgcacttcccgcgacaataccggcgtgtttgccaattaccag
acggatattggtgcaacgcggctggatgtttctgcccgtcacgacaagaacgaacagttt
ggcagcaacaataccgggaacattgcggtcgggcgggatctcaataatgggatgcgggta
acggctgcgtatggcacggcatttaaagccccgacgttcaataatctgtattacccgttc
agtggtgacccgaatttgcagccggaaacctcccaaagtgtggaactcggcgtctccggc
aaattagcaggtgacaaggtacagtggtcagccaatgcctttagtaatgagattgacgat
ctgatcagttacccaccaccggattacgccgttagtcagaccgacaaggcgcggattcgc
gggctggaattgagtgctactacgcaagtggcaggctgggacatcaacgccaatgctacc
gtgcagcagccggaaaaccgcagcggcacgaatactggtaagaccctgatttaccgaccc
aagcagtttgccaatgtggatgttgaccgtgaaatgggcaaattccgtgtgggcggcagc
gtccatgctgaaagccagcgttacaccgacgatgccaataccgagagcaaaaaactggcg
ggttatggcacgctggacttacgcgctgattatcgggtgtcgaaagactggacagtgggc
gcaaaagtcggcaacgtactgaacaaggattaccaaaccagcaacggctataatcaagac
ggtgttaatggcttagtaacagttaagtacgcgccgaagtaa
DBGET
integrated database retrieval system
