Thiothrix litoralis: J9253_14135
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Entry
J9253_14135 CDS
T07754
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tlo
Thiothrix litoralis
Brite
KEGG Orthology (KO) [BR:
tlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tlo03400
]
J9253_14135
DNA repair and recombination proteins [BR:
tlo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J9253_14135
Archaeal homologous recombinant proteins
J9253_14135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
SbcC_Walker_B
AAA_29
AAA_27
DUF3188
Motif
Other DBs
NCBI-ProteinID:
QTR45136
LinkDB
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Position
2928099..2929943
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AA seq
614 aa
AA seq
DB search
MIITSIIADNFRKYAHLQLDNLPERGLIALVGGNESGKSSIGDAIQFGLFGRTDQVKPEE
AAKLIHWGVSQASVALRLQHRGHEYRLVRSVDSDGNVATTLFSTEEEITLADTPETVERQ
LEALFGYYYTAFSKAFYWGHSKDSDSDNLRAMAGLKEHATISGQLEREQQERLDTLKELE
ARRRHTAQSIDTLHIDEEQLPRLNRIVSDVEDRQQHLALLGQRLGKASVAYPNNLEKFHG
VDAHSRKIGRWTLITLSVFLLALLVGLFLMLMPDWGNQLLSDISVATLDGLSKTTIRLAS
IAALIGAVLLMYGWYVEVRRLRPLQTQAKNLTRALEESYQACTQPVSRQLATDSTDYLLE
KHLDLPEASTTHPDMIAVPEWTKAASQYKAKALYVHSATDTLNVGLSNRNEEMTEYLEVL
KADIHAIQQQLDHQAHLQVLVAQQENALEQERRQQVVTTTAVDLLKRDASHSIGRFNQLV
KTRCPELLQRFTQEHYKSLEISPDFNLKLLSEEKGDFLDFNEISTGTQRQVALAMRIALA
NALADATKTDKQMLFLDEPFAFFDPERTNNTLHSLAETSKGVISQIWLTAQTKPEGIKLV
QVINCQQRSNTLKV
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgattattacctccattatcgctgataatttccgcaagtacgcccacctgcaactcgat
aacttgcctgagcgtggcttgatcgctctggtaggtggcaatgaatcgggcaaaagcagc
atcggtgacgccatccagttcggcctgttcgggcgcaccgatcaagtaaagcctgaagaa
gccgccaaactgatccactggggtgtaagtcaggccagcgtagcgctgcgcctgcaacac
cgggggcacgaataccgactggtacgctcggtcgacagcgacggcaatgtggctaccacg
ctattttccaccgaagaggaaatcacccttgccgataccccagaaaccgtggagcgccag
ctcgaagccttgtttggctactattacacggcgttttccaaagccttttactggggacac
agcaaggatagcgacagcgacaacctgcgtgccatggcggggttgaaggaacatgccacg
atcagtgggcaattggaacgcgagcaacaagaacgccttgacaccctgaaagagctggaa
gccagacgccgacataccgcccaatccatcgacaccttgcacattgatgaagaacagctt
ccgcgcctgaaccgtattgtgagcgatgtggaagaccgccagcaacacctagccttgctg
gggcaacggctcggcaaggcatcggtggcttacccgaataatctggaaaaattccacggg
gtcgacgcccacagccgtaaaatcgggcgctggacactcatcaccctgagcgtttttttg
ctggctctgctggttggcttgttcctgatgttgatgccggattggggtaaccaattactg
agtgacatatccgtcgccaccctcgacgggctgagcaaaacgactatccgccttgcctcc
atcgctgcgctgatcggcgcggtgttgctgatgtacggctggtatgtggaagtgcgccgc
ctgcgccccttgcaaactcaggccaaaaacctcacccgcgccctagaagaaagctatcaa
gcctgcacccagccggtcagccgccaattagccacggacagcacggattatttgctggaa
aagcaccttgacctgccggaagccagcaccacgcaccccgacatgatagccgttcctgaa
tggactaaagcagccagccaatacaaagccaaagccctgtacgtacacagcgccaccgac
accctgaacgtcggtctgagcaaccgcaacgaggaaatgacggagtaccttgaagtgctc
aaggctgacatccacgccatccaacagcaactggatcaccaagcccacttgcaagtattg
gttgcgcaacaagaaaacgcactagagcaggaacgccgtcagcaagtcgtcacgaccacc
gccgtcgatctgttaaaacgggatgccagccattccatcgggcgtttcaaccagttggtc
aaaacccgctgcccggaattgctgcaacgtttcacccaagagcattacaaatcgctggaa
atctcccccgatttcaacctaaaactgctgtcggaagaaaaaggcgatttcctcgatttc
aacgaaatctccaccggcactcaacggcaagtggccttggcgatgcgcattgcgctggcg
aatgccttggcagatgccaccaaaaccgataagcaaatgctgtttctggatgagcctttc
gccttttttgacccggagcgcaccaacaacactctgcacagtctggcagaaaccagcaaa
ggggtgatcagccaaatctggctgacggcacaaaccaagccggaaggtatcaaattggta
caagtgattaactgccagcaaagaagcaacaccctgaaagtatag
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