Thiorhodovibrio litoralis: Thiosp_01392
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Entry
Thiosp_01392 CDS
T09560
Symbol
rfbC_2
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
tlr
Thiorhodovibrio litoralis
Pathway
tlr00521
Streptomycin biosynthesis
tlr00523
Polyketide sugar unit biosynthesis
tlr00541
O-Antigen nucleotide sugar biosynthesis
tlr01100
Metabolic pathways
tlr01110
Biosynthesis of secondary metabolites
tlr01250
Biosynthesis of nucleotide sugars
Module
tlr_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
tlr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
Thiosp_01392 (rfbC_2)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Thiosp_01392 (rfbC_2)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Thiosp_01392 (rfbC_2)
Enzymes [BR:
tlr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
Thiosp_01392 (rfbC_2)
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WPL11642
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Position
complement(1562252..1562824)
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AA seq
190 aa
AA seq
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MNVITTPLPGVLIIEPQVFGDERGFFLETWQQERYAEAGIGPTFVQDNLAYSRRGVLRGL
HLQNPYAQGKLVQVLRGEVFDVAVDVRRGSPSFGRWHGCLLSEENKHQFWVPAGFAHGYL
VTAEDALFSYKCTDSYHPETQFSVRWDDPAIGIDWPLSGPPTLSDADRNALPLAEIAPER
LPLFKRPART
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgtcatcaccactccactccccggcgtcctcatcatcgagcctcaggtcttcggc
gacgagcgcggctttttcctcgaaacctggcagcaggagcgctacgccgaagccggcatc
gggcccacctttgtgcaagacaacctcgcctattcccgtcgcggagtactgcgcggactg
catctgcaaaacccatacgcccagggtaagctggtgcaggtgctgcgtggagaggtcttc
gacgtggccgtcgatgtgcgccgcggctcgcccagcttcgggcgttggcatggctgcctg
ctgagcgaagagaacaagcatcaattctgggtgccagcaggctttgcccacggctacctg
gtaacggctgaagacgcattgttcagctacaaatgcaccgacagctaccaccccgagacc
caattctcggtgcgctgggacgacccggccatcggcatcgactggccgttgagcggtccg
cccacgctgtccgatgccgaccgcaacgcgctcccgctcgccgagatagccccggaacga
ctgccgctgttcaaacgaccggcgcgcacatga
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