Thermosulfurimonas marina: FVE67_06180
Help
Entry
FVE67_06180 CDS
T06536
Name
(GenBank) hypothetical protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
tmai
Thermosulfurimonas marina
Pathway
tmai03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tmai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
FVE67_06180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmai03400
]
FVE67_06180
Enzymes [BR:
tmai01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
FVE67_06180
DNA repair and recombination proteins [BR:
tmai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
FVE67_06180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
QJA06412
UniProt:
A0A6H1WT98
LinkDB
All DBs
Position
1185569..1186480
Genome browser
AA seq
303 aa
AA seq
DB search
MLPRVIKPMLAKLSEPFDSPRFLYEIKWDGTRALFFLEGSALRIQNRRLRDITYRYPEFW
GLPQLFSRSGLVLDGEIVVLSGGRPSFRLLQEREHVASRVKIEALSRRLPATYMVFDLLY
LEGRSLMETPLRERRRILREILPESPYLVESRYVLEKGRAFFEKVVSEGFEGVMAKDLES
PYLPGKRVDFWLKFKARGRCTCLIVGYLLRPDGTLKSLLLAEPTPEGLVYRGRAASGLSL
PEADRLLSRLRALEVPSPPLLRGRRFPQGARWVSPELSCVVSYQEVTSEGRFRAPVVEKV
EGL
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgctcccccgggtcatcaaacctatgttggccaaactctccgaaccctttgactctccc
cgtttcctttacgagatcaaatgggacggcacccgggccctcttctttctggaagggagc
gccctgcgtatccaaaatcgccgcctacgggacattacctaccgctatccggagttctgg
ggacttccgcaactcttttcccgctccggtctggtactcgacggggagatcgtggtcctt
tctggagggcgtccctccttccgtcttctccaggagagggaacatgtggccagccgggta
aagatcgaggccctttctcggcggctgcccgccacctatatggtctttgacctcctctat
ctagagggccgttctctcatggaaacccccctccgagagcgtcgccggatcctgcgggag
attcttccggaatccccctatctggtggagtcccgctatgtgttggaaaaggggcgggcc
tttttcgagaaggtggtctccgaggggtttgaaggggtaatggccaaggatctggagagt
ccctatcttccgggaaagagagtggacttctggctaaaatttaaggctcggggccggtgt
acctgtcttattgtaggttacctcctgcgtccggatgggaccctcaaaagcctcctcttg
gccgaacccacccccgaggggctggtctaccggggaagggctgccagcgggctttcccta
ccggaggcagaccgactcctttcccgccttcgggccttagaggttccttctccacccctt
ctccgggggcgacgttttcctcaaggggcccgctgggtctctcccgagctctcctgcgtg
gtctcctatcaggaggttacttccgaggggcgcttccgggccccggtagtggagaaagtg
gaggggctttga
DBGET
integrated database retrieval system
