Treponema medium: DWB79_00555
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Entry
DWB79_00555 CDS
T07695
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
tmed
Treponema medium
Pathway
tmed03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tmed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DWB79_00555 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmed03400
]
DWB79_00555 (uvrB)
DNA repair and recombination proteins [BR:
tmed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DWB79_00555 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DWB79_00555 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
Flavi_DEAD
Kinesin
HPF1
SLFN-g3_helicase
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
QSH96276
UniProt:
A0A898DBQ7
LinkDB
All DBs
Position
complement(120907..122898)
Genome browser
AA seq
663 aa
AA seq
DB search
MKQFKLIADYQPAGDQGDAIRQLADGILAGDRFQTLKGVTGSGKTFTMANIIQAVQKPTL
IISHNKTLAAQLYREFKGFFPENAVEYFVSYYDYYQPEAYVPARDLYIEKDAAINDEIDR
LRLSATFSLMERRDVIVVSTVSCIYGLGLPESWRDLRITIEKGQTIDPGKLKKQLISLQY
ERNDAVLERGRFRVKGDVMEVFPAYMEEAYRIEFDWEEIVRIRRFSPLTGEVSQEYEELS
IYPAKHFVMPENAIPNAIERIKQELDARLETFKAQGKLFEAERLKTRTEYDIEMLSEMGY
CPGIENYSAPIANRKPGEPPATLFHYFPKDFLLFMDESHVTFPQIGAMYEGDRSRKQNLV
DFGFRLPCALDNRPLKINEFETMLNQAVFVSATPGPKELQYSTRVVEQLIRPTGLLDPLI
EIHPSEGQMEHIYGEVKKRIAKDERSLILTLTKKMAEDLTDYLTGLGLKVKYIHSEVETI
ERVEILKGLRAGEFDVLIGINLLREGIDLPEVSFIGILDADKIGFLRSTTSLVQIVGRAA
RNANGSVVMYADRISDAMKETIEETTRRRSIQQAYNDEHGITPKTIKKSIEDILVRETEI
KKEAARAETEPLVNSFNILNPADRKKLIKKLEAQMAEYADMLLFEEAAVVRDKIEEIKRL
ASF
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagtttaaactcatagcggattatcagcctgcgggcgaccaaggagatgcgata
cggcagcttgcggacggcatacttgccggcgaccggtttcaaacactcaaaggtgttacc
ggttcgggcaagacttttacgatggcgaatatcattcaggcagtgcaaaagccgacgctg
attatcagccacaacaaaacgcttgcggcgcagctctaccgcgagttcaaaggctttttc
cctgaaaacgccgtcgaatactttgtttcatactatgattactaccagccggaggcgtat
gttccggcgcgagacctctatattgaaaaagacgctgcaattaacgatgagatagaccgg
ttgcggctttcggcaacgttcagcttgatggagcgacgggatgtcattgttgtgtcaaca
gtgtcgtgcatttacggcttaggtttgcccgaatcatggcgcgatttacgcatcaccata
gaaaaagggcagaccattgatcccggtaaactcaaaaaacagctgatcagcttgcaatac
gaacgcaacgatgcggtgttggaacgcggtcggttccgtgttaaaggcgatgtgatggaa
gtattccctgcctatatggaagaagcgtaccgcatcgaatttgactgggaagagattgtg
cgtatccgccgctttagcccgctgaccggcgaagtgagccaagaatacgaagagctttcg
atctatcccgcaaagcactttgttatgccggaaaatgctatccccaatgccatcgagcgg
attaagcaggagcttgatgcacgtttggaaacgttcaaggcgcagggaaagctctttgag
gctgaacggctaaaaacccgtaccgaatacgatatcgaaatgctctccgagatggggtat
tgtccgggtatagaaaactactctgcaccgattgcgaaccgcaagccgggtgagccgcct
gcaacgctttttcattactttcctaaggacttcctcctttttatggacgaaagccacgta
acctttccgcagatcggcgcgatgtacgaaggcgaccgcagccgcaagcagaaccttgta
gacttcggcttccggctcccctgcgcgcttgataaccgcccgctcaaaatcaatgagttt
gaaacaatgctcaatcaggctgtctttgtttccgcaacgcccggtcccaaagaattgcaa
tattctacccgcgtcgttgagcagctcatccgcccgaccggtctgttagacccgctcatc
gaaattcatccgagcgaggggcagatggagcatatctacggtgaggtgaaaaaacgtatc
gcaaaggacgagcggagcctcatcctcaccctcaccaagaagatggcggaagaccttacc
gactacctcaccggtctgggcttaaaggtaaagtacattcacagcgaggtggaaaccatc
gagcgggtagaaatcctcaaaggcttgagggcgggtgagttcgatgtgctcattggaatt
aacctcctgcgggaaggtatcgacctgccggaagtgtcgtttatcggcatcctcgacgcg
gataaaatcggctttttgcggtcaactaccagcctcgtacagattgtcgggcgggcggcg
cgtaatgccaacggcagcgtagtgatgtatgccgaccgtatcagcgacgcgatgaaggaa
acaatagaagaaacaacccgccgccgttcaattcagcaagcctacaacgatgagcacggc
attacgcctaaaaccatcaaaaaatccatcgaggatattctggtacgcgaaacggaaatc
aaaaaagaagccgcccgcgccgaaacagagccgcttgtcaacagcttcaatattctgaac
cccgccgaccgcaaaaagcttatcaaaaagctcgaagcacagatggctgaatatgctgat
atgctcctctttgaagaagcggcggtggtgagggataagatcgaagagattaagcgcctc
gcttccttttga
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