Talaromyces marneffei: EYB26_003154
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Entry
EYB26_003154 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
tmf
Talaromyces marneffei
Pathway
tmf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EYB26_003154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tmf03041
]
EYB26_003154
Enzymes [BR:
tmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EYB26_003154
Spliceosome [BR:
tmf03041
]
Complex A
U2 snRNP components
U2 related factors
EYB26_003154
Complex B
EYB26_003154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
79163127
NCBI-ProteinID:
XP_054118432
LinkDB
All DBs
Position
2:complement(join(2203315..2203589,2203650..2206022,2206080..2206488,2206549..2206890,2206972..2207115))
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AA seq
1180 aa
AA seq
DB search
MARRGDTRSPSPVGSTYSSSKRSRRDEDRFDRDGRDEGRPHRRSRSPDRRYRDRDGYRRR
DRDRSVDRRDRNGYRDEHNYRPSKRDRSRERRRSLDRRSDRDYRRRSRERERSHDRDNRS
RRDDSRDRVRRHRDDSTDSRRKARKDSRDRSLNRDSAAVSREASKATTPAPAAQTDEEKK
AERLAKLEAWKQKQAAERERKQRELAAAGGPRSILTEIDKKSGLSPLSPAPTSPSTPTSV
TASSEYGGKFDPKAIAKKATGVTSQSSLLGKDVIVPDSDRADGIIKANKLPVAPGKASAA
PLKASGNVGKFGFGNKLAAETEKSSAKRTLDFGEEESKRKKLEKLPSPPPEDTEDATKDI
VAEDDDSDVDMENGTEEENVAAARAAAEKREERLQAQQVEPNGDIAMSDAAAANEAAANA
EEEEIDPLDAFMSGLTEKPSFKKPSIIKSAKSKQQQPQAMFGDEDDIDMSAVAHGDTDDF
LAIAANKAKKKKDIPTVDHAKAEYEPFRKSFYTEPLDLAQMTEEEVASLRLELDGIKVRG
VDPPKPILKWSQCGLGVQTLDVISKLGYEHPTSIQSQALPAIMSGRDVIGVAKTGSGKTV
SFLLPMFRHIKDQRPLENMEGPISLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAP
IKDQIAELKRGAEIVVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVM
KIMTNIRPNKQTVLFSATFPRNMEALARKTLIKPVEIIVGGRSVVAPEITQIVEVRNENT
KFLRLLELLGNLYSDEANEDARTLIFVDRQEAADSLLRELMRKGYPCMSIHGGKDQIDRD
STIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTA
VTFLTEDQERYSVDIAKALKQSGQAVPEPVQKLVDSFLEKVKAGKEKASASGFGGKGLER
LDQERDAARNRERKTYRTGEDGDEEEREDAKEKKGEEIFAKAASAIQSASAPTPGIPKGI
DLDGKITVHKTEKPAAGKSNDPLDKVGSAVADIHARLNRAGVMRSGVPIDNKGPDAGAFH
ATLEINDFPQKARWAVTNRTNVAKILEATGTSITTKGNYYPSGKEPGPGDIPKLYILVEG
DTELVVTNAMRELMRLLKEATIAAADSEARAPTSGRYNVV
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atggctcgccgcggggatacgcgctcaccatcacctgtaggcagcacatactcttcatcc
aaacgaagtcgcagagatgaggatcgattcgacagagatggacgcgacgagggaaggccg
caccgtcgatcacgcagtcctgataggcgatatcgagatcgggatggctatcggcgacgg
gacagggatcgatcggtagacagacgggatcgcaatggttatcgcgacgagcacaattac
agaccatcgaaacgggaccggtcgcgcgaacgccggcgctcgctagaccgacgctccgat
cgggactatcggcggaggagtagggagcgagaaagaagtcatgatagggacaatcggagt
aggcgagatgactcccgcgaccgagtccgaaggcacagagacgattctactgactcgagg
agaaaggccagaaaagacagcagagacaggtcgctgaaccgagactctgctgctgtatca
cgagaggcctccaaagccacgactccagccccagccgctcagacggacgaagagaagaaa
gccgagcgactcgcaaaattggaggcgtggaaacaaaaacaagccgctgaacgcgaacgt
aagcaacgcgagctcgctgctgcaggtgggccccgcagtattttgaccgaaatcgacaag
aaatcgggactctccccattgtcccctgctcctacttctcctagtacaccaacctcggta
accgcatcctccgaatatggtgggaaattcgatcccaaggcgattgcaaagaaagctact
ggtgttacatcacagtcatctcttttgggcaaggacgttattgttcctgattctgataga
gctgacggcataatcaaggctaacaaacttccagtcgcgccaggcaaggcttctgctgct
cccttgaaagcgagcgggaatgttggtaaattcgggtttggaaacaaacttgccgccgaa
accgagaagtcttccgcgaaacgaaccctagactttggcgaagaggaatccaagcgtaaa
aagctcgagaaattacctagtcccccacccgaggatacagaagacgccaccaaggatatc
gtggccgaagacgatgattccgatgttgacatggaaaatgggacagaagaagaaaatgta
gccgcagcacgagcagccgcagagaagcgggaggagcgcctacaagcccaacaggtggag
cctaacggcgatatagcaatgagcgatgcagctgcggccaacgaagccgccgcaaatgcc
gaggaagaggaaattgatcctttggatgcctttatgtctggtttgacggaaaaaccttca
ttcaagaagcctagtattatcaagtcagctaaaagcaagcagcagcaaccgcaagctatg
ttcggcgacgaagatgatatcgacatgtcagctgttgctcatggtgatactgatgacttt
cttgccatagctgccaacaaagctaaaaagaaaaaggacattcctaccgttgaccacgca
aaggcagaatatgaacctttccggaaaagcttctatactgaacctcttgatttggctcag
atgacagaagaagaggtagccagtctccgacttgaacttgacggtatcaaagtccgtgga
gttgatcccccaaagccgatcctgaaatggtctcaatgtggtctcggtgtgcaaacactg
gacgtcatcagtaagcttggttatgagcacccaacctcaattcagagccaggctcttcct
gctatcatgtcaggaagagatgtcatcggtgtcgctaaaacaggttctggaaaaacagtc
tctttccttctgcccatgttccgtcatatcaaagatcaacgtcctttagagaatatggag
ggcccgattagtcttatcatgacgccgacgagagaattggcaacgcaaatccacaaagac
tgtaaacctttcttgaaggcgttgaatcttcgcgctgtatgtgcttacggtggcgctccc
atcaaagaccagatcgcggaattgaaacgaggtgctgaaatagttgtttgcacacctggc
cgaatgattgatcttctagctgctaatgctggccgagttacaaatctgcgacgagttacc
tacgtcgtgcttgatgaagccgatcgaatgttcgacatgggtttcgagccacaggtgatg
aagatcatgacgaatattaggcctaacaagcaaacagtgttgttctccgctactttccca
cgtaacatggaagcactcgcacggaaaaccttgatcaagcctgtggagattattgtaggc
ggcaggagtgtggttgcgcccgagatcacacaaattgttgaagttcgaaatgagaatacc
aaattcttgcgccttctagaactccttggcaacctttattccgacgaagcaaatgaagat
gctcgaactctaatcttcgttgaccgccaagaagctgctgacagtctacttcgtgagttg
atgcgcaagggctatccttgcatgtctattcacggtggcaaggaccaaattgaccgagat
tctaccattgaggattttaaggcgggaatattcccagttttgattgcgacatctgttgct
gctcgtggcttggatgttaagcagttgaagttggttgtcaattatgacgcaccaaatcac
ttggaagattacgttcaccgagccggacgtacaggtcgtgctggaaacaccggaactgca
gttacattcttgactgaggatcaagaaagatattccgtcgacattgcaaaggcactcaaa
caaagtggccaggcagtcccagaacccgtccagaaattagtcgactccttccttgaaaag
gtcaaagccggcaaagagaaagcttcagcatctggctttggaggcaagggattggaacgc
ctggaccaggaaagagacgctgccagaaaccgtgaacgcaagacatatcgtaccggcgaa
gatggcgatgaggaagaacgggaagacgcgaaagagaagaagggcgaagaaatatttgcc
aaggctgcctccgctattcagtctgcctctgcacctacaccaggtataccaaagggcatt
gatttggatggcaagattacggtccataagaccgagaagccagctgctgggaaatctaat
gatccccttgacaaggttggttcggctgtcgcggatatccacgcacgactgaaccgtgct
ggagtgatgagaagcggtgttccgattgataacaaaggtcctgatgcgggagcattccat
gcaactttggaaattaacgactttcctcaaaaagcacgttgggcagtcaccaaccgtacc
aatgtcgccaaaatcctcgaggcgacaggtacctcaatcacaaccaaaggcaactattat
ccatcaggcaaggagcctggaccaggcgatatcccgaagttgtatatccttgtggaaggt
gatacagaactggtcgttacgaatgctatgcgagaattaatgcggttgctgaaagaggct
acaattgcggcggcggatagtgaggctagggcaccaactagtggacgatacaatgttgtg
tga
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