Thiomicrospira microaerophila: JX580_05070
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Entry
JX580_05070 CDS
T08259
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
tmh
Thiomicrospira microaerophila
Pathway
tmh00521
Streptomycin biosynthesis
tmh00523
Polyketide sugar unit biosynthesis
tmh00541
O-Antigen nucleotide sugar biosynthesis
tmh01100
Metabolic pathways
tmh01110
Biosynthesis of secondary metabolites
tmh01250
Biosynthesis of nucleotide sugars
Module
tmh_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
JX580_05070 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JX580_05070 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JX580_05070 (rfbC)
Enzymes [BR:
tmh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
JX580_05070 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
DUF6370
Motif
Other DBs
NCBI-ProteinID:
UQB43248
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Position
1062174..1062758
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AA seq
194 aa
AA seq
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MQFIKQAIEDVILIEPKVHGDQRGYFVETFRQDKFEQAIGYQVNFCQDNESKSTKGVLRG
LHFQLPPFAQSKLVRVIEGEVLDVAVDIRQNSPTFGQHVAVILNDTNKHQLFIPRGFAHG
FVVLSDTATFAYKVDNYYSPECDRGMAYNDPNLNIDWHLKPDQLQLSTKDQNQPGLVDIK
PESAAFDYGINLYV
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttattaagcaagcaattgaagacgtcatcctaatcgaacccaaagtccacggt
gatcagcgtggctattttgtcgaaacctttcgccaagacaaatttgaacaagccatcggt
taccaagtcaacttttgtcaagataacgaatccaaatctaccaaaggcgtcttgcgcggt
ttacattttcaactcccgccgtttgcgcaatccaaactggtgcgcgtgatagaaggcgaa
gtgctcgacgtcgccgtcgatatacgccaaaacagcccaacctttggacaacacgttgcg
gtgatcttaaacgacaccaacaaacaccaactgtttatcccgcgcggcttcgctcacggc
tttgtcgtgctcagcgacaccgccaccttcgcctacaaagtcgataactactactcaccc
gaatgcgatcgcggcatggcttacaacgacccaaacctcaacattgactggcacctaaag
ccagaccaactgcaactgtccaccaaagaccaaaaccaaccaggcctggtggacatcaaa
cccgaatccgccgcgtttgattatggaatcaatttgtatgtctaa
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