Temperatibacter marinus: QGN29_02405
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Entry
QGN29_02405 CDS
T09370
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
tmk
Temperatibacter marinus
Pathway
tmk00521
Streptomycin biosynthesis
tmk00523
Polyketide sugar unit biosynthesis
tmk00541
O-Antigen nucleotide sugar biosynthesis
tmk01100
Metabolic pathways
tmk01110
Biosynthesis of secondary metabolites
tmk01250
Biosynthesis of nucleotide sugars
Module
tmk_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
tmk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
QGN29_02405 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
QGN29_02405 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
QGN29_02405 (rfbC)
Enzymes [BR:
tmk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
QGN29_02405 (rfbC)
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WND03219
UniProt:
A0AA52H9S4
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Position
complement(530049..530612)
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AA seq
187 aa
AA seq
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MIAEELEIPGVYLFKPKKFGDERGFFSETFNAQTLGDYLGPLNFVQDNHAYSKDKGVMRG
LHFQAPPFDQGKLVRVTRGSVLDVIVDIRTGSPTYGQHLSVELSAENWAQLWVPPGFAHA
YCTLEDHTEFVYKVTNFYSPDHDGGIAYDDHELGIEWPMPFDQMTVSDKDKKHPKLSELI
SPFTYEV
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgattgctgaagaattagaaatccctggtgtctatctctttaaacccaaaaaatttggg
gatgaaagaggctttttctctgaaacttttaatgctcagacattaggtgactatttgggg
cccttgaattttgttcaggacaaccatgcctattcaaaagataagggtgtgatgcgcggg
ttgcatttccaagccccgccttttgatcaagggaaacttgtgcgtgtgacgcgcggcagt
gtgcttgatgtgattgttgacattcgcaccggatcacccacctatggacaacatctttca
gtggaactgagcgctgaaaattgggctcaactctgggtaccacctgggtttgcacatgca
tactgtacgctagaggatcatacggaatttgtttataaagtaacaaatttttattcgcct
gaccatgatggtggcattgcctatgatgatcatgaattggggattgagtggcctatgcct
tttgatcaaatgacagtttcggacaaggacaaaaaacatccaaaactttcggaattgatc
tccccctttacttacgaagtctaa
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