Tuber melanosporum: GSTUM_00001816001
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Entry
GSTUM_00001816001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tml03009
]
GSTUM_00001816001
Ribosome biogenesis [BR:
tml03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
GSTUM_00001816001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
RLI
SMC_N
AAA_21
AAA_22
Fer4
Fer4_6
RsgA_GTPase
AAA_13
Rad17
AAA_15
AAA
nSTAND3
Fer4_21
AAA_24
TsaE
Fer4_10
ATPase
SRP54
AAA_23
Fer4_9
Fer4_16
DnaB_C
PduV-EutP
DLIC
Fer4_7
Motif
Other DBs
NCBI-GeneID:
9187175
NCBI-ProteinID:
XP_002835993
INRA:
GSTUM_00001816001
UniProt:
D5G6K7
LinkDB
All DBs
AA seq
568 aa
AA seq
DB search
MADKLTRIAIVSTDKCKPKKCRQECKKSCPVVRTGRLCIEVTPESRIAFISEQLCIGCGI
CPKKCPFGAIHIINLPTNLETQVTHRYSANSFKLHRLPTPRPGQVLGLVGTNGIGKSTAL
KILSGKQKPNLGRYDNPPDWNETLAYFRGSELQNYLTKVVEDNIKAVVKPQYVDKLPLAI
RGTVRSVSALLKAQCARGDEVMEAMIDILDLRPVLDRDVEQLSGGELQRFAIAVACVQKA
DVYMFDEPSSYLDVKQRLKAASTIRGLTRPDNYVIVVEHDLSSLQFRIAEAGDEFMVDRS
RSFGYPAMDKTLGKFHLHVDKGEFTDSEIIVMMGENGTGKTTFCRMLAGVEAPDGSKKIP
KMSISMKPQKITPKFPGTVRELFLKRIRSSFLNPQFQTDVYKPLHIDDFIDQEVKHLSGG
ELQRVAIVLALGMPADIYLIDEPSAYLDSEQRIIAARVIKRFIMHAKKTAFVVEHDFIMA
TYLADRVIVFEGEPSIDATATAPQSLLTGCNAFLKSLNVTFRRDQNTFRPRINKLDSQLD
QEQKLSGNYFFLEGMLRPPIYSSGYLLT
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaacttacacgtattgctattgtgagcacggataagtgtaaaccaaagaaa
tgtcgacaagaatgcaaaaagtcgtgtccggtcgtcaggacaggaaggctatgcatcgag
gtcacgccggagtctaggatcgcttttatctccgagcagctgtgcataggttgtggtatc
tgtccaaagaagtgtcctttcggagcaattcacatcatcaatcttccaaccaacctcgaa
actcaagtcacccatcgttactccgcgaattcattcaagctccacagattacctactcct
cgacctggtcaggtccttggtcttgttggaacgaacggtattggaaagtccaccgctctg
aagattctttccggaaagcaaaagccgaatttaggccgttacgataatcccccggattgg
aatgaaacattggcctacttccgtggctcggagttgcagaactacttgacaaaggtcgtc
gaggataatattaaggcggttgtcaaacctcagtatgttgataagttgccactggcgatt
cgagggactgtgaggtctgtgagtgcattgcttaaggctcagtgcgcacggggggatgaa
gtcatggaggctatgattgacatccttgatctgcgtcctgttttggaccgcgatgttgaa
cagctttctggtggagagctgcaaagatttgctattgctgtcgcatgcgtacaaaaggcg
gatgtttacatgtttgacgaaccctcatcttatctcgatgtcaagcaacgcttgaaggcc
gctagcaccatccgcggcttaactagacctgacaactacgttattgttgtggaacacgat
ttgtcgtctctccagttcagaatcgcggaggccggagacgagttcatggttgataggtca
cggtcatttggatacccagccatggacaagacacttggaaaattccacctccatgttgac
aaaggagaatttaccgattcggaaattatcgttatgatgggagagaacgggaccggaaaa
acaacattctgtcgcatgcttgctggtgtcgaggctccagatggaagcaagaagatcccc
aagatgagcatctctatgaaaccacagaagatcactcccaagttccctggaactgtgcga
gaactattcttgaaacggattagatcctcattcctcaacccccagtttcaaactgatgtc
tacaaaccgttgcacattgatgattttatcgaccaggaggtaaagcacttgtctggggga
gaattgcagcgggttgccatagtccttgccctcggcatgcccgccgacatctaccttatt
gatgagccgtctgcctatctcgattccgaacagcgtatcattgcagcccgtgtcatcaaa
cgatttatcatgcatgctaagaagactgcgtttgtcgtcgagcacgatttcattatggcg
acatacctggcggatcgcgttatcgtcttcgaaggtgaaccttccatcgacgccacagcc
actgctccacagagtttgttgactggttgtaacgccttcctgaaatcactaaacgtcacg
ttccggagagatcagaacacttttagacctaggatcaataagttggattcgcaacttgac
caggagcagaagttgagtggaaattacttcttcctagaaggtatgctacggccccctata
tattcctccggatatctactaacatga
DBGET
integrated database retrieval system