Tuber melanosporum: GSTUM_00010783001
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Entry
GSTUM_00010783001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00010783001
03036 Chromosome and associated proteins [BR:
tml03036
]
GSTUM_00010783001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
GSTUM_00010783001
Chromosome and associated proteins [BR:
tml03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
GSTUM_00010783001
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
GSTUM_00010783001
microRNA pathway
RISC loading complex
GSTUM_00010783001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoL2
ArgoN
ArgoL1
ArgoMid
Motif
Other DBs
NCBI-GeneID:
9182179
NCBI-ProteinID:
XP_002841562
INRA:
GSTUM_00010783001
UniProt:
D5GML0
LinkDB
All DBs
AA seq
863 aa
AA seq
DB search
MEADTRLRPPARKVHGDGEPYKVWANHFVIQSLPRLQLYMYDIRVTAAGKKEGSSEEVKQ
CPPAMIGRILQTPQAKEILGDGFVFDGVSIGWATKKLPIEGDTATFGLEIPGARPGRAFG
CTIGVQYDGPFTCDALTNWVLREQQKGITIEALANYEQDQEVLLCLKFINSLLRKDCTER
FVSGQGNKSTTFFDKSRDGNTSLTLSSTQGVIEAWRGFYQTASARFGQITVNVDTATATF
IKPGINFIDAISRFSGVQPEDLERGFDGNRERIMEAAKKFSGVGFKVKHIKGPKGEISRR
GFRLTRLSAEEDTFQIRNWNTDDEGNKTFTLEEISIAEYYSRQYNIKLRYPKLPTVETRK
GDKYPLELCFVDDAERWKELLQGGETAEFIKFAAAPAFARRSQIEESLKKIGWHNMKPLE
EFGVSIKPQFIELEAKILPSPVVVFGQGTENSGPRNGRWNLRGKRFYKPGTINGYGLLYI
PGGHGMRVDERGIDTFTKTCGQQFSHYGVSTNPRCSPQWAMANPQGDFERQIHELISKLQ
TRNGLRPNLLIFILPSVAVEPYCTIKKICDTTFGIASQCMVLEKCFNPKGQLQYLANIAL
KVNVKLGGSNMVIDDPFLMKQPTMIMGCDASHPNPAQRRMDPPPPTFTAISASYDRRCAK
YSAVTSCQPAGQEMIQDFGAMTQELLKRFQEQAKRDPSAIIYFRDGLSESELDKVVRSEL
AELKKVTKAKISVIVCVKRHHTRFFPLDKGDKNGNIAVGTVVENGHGKDIFMVSHAGLQG
TVRPTHYMMLHDENNLTAVDFQRICNNVCYAYGRATVSVSIAPPVYYANLACDRARSHVV
HTNQGQSELLQVHDLLKYSMWWQ
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggatacacggctccgtccgcctgcccgtaaagtccacggcgacggggaacca
tacaaggtttgggcaaaccacttcgtgatccagtccttgccaaggttgcaactttatatg
tatgatattcgcgtgactgctgcgggaaagaaagaaggttccagtgaagaggtcaagcag
tgtcctccggccatgatcggtcgtattttgcagactccacaggccaaagaaatcctcggt
gatggttttgtatttgatggcgtttctattggatgggctactaaaaaactcccgatcgag
ggtgatactgctacgtttggcttggagattccaggtgctcgtcccggaagggcctttggg
tgcaccattggagttcagtatgatggcccattcacttgcgacgccttgaccaactgggtt
ttaagggagcaacagaagggaattactatcgaagccctcgcaaactatgagcaggaccag
gaagtacttctctgtcttaagtttatcaactcgcttttgcgtaaagactgtaccgagagg
ttcgtcagcggccaaggcaataagtcgactacattcttcgataaatcccgtgatggcaat
acatccttgaccctcagctccactcaaggtgtgatcgaggcctggcgtggattttaccaa
accgcctctgcccgcttcgggcagattacagtgaacgtcgacactgctactgccactttc
atcaagcctgggataaattttattgatgcaatctctaggttttccggagttcaaccggag
gacctcgagcgcggatttgacggtaatcgcgaaagaatcatggaggctgcgaagaagttt
agcggcgtcggattcaaggtcaaacatatcaagggtccaaagggcgagatttctaggcgt
gggttcagacttacgcgtttgagtgctgaagaagatacattccagattagaaactggaac
acagatgacgaggggaataagactttcacccttgaggaaatcagtatcgctgagtactat
tcccgccaatacaatattaaattgagatatccgaaacttcccacagtcgaaaccagaaag
ggagacaagtatccccttgagttgtgctttgttgacgatgcggaacgctggaaagagctc
ctccagggaggtgagactgcggagtttataaagtttgcggcggctccggcatttgcccgc
cggagccagatcgaggagagcttgaaaaagataggctggcacaacatgaagccacttgag
gaatttggtgtttctattaagccacaattcattgaattggaagccaaaatcctaccttcc
ccggttgtggtctttggccaaggaactgagaactctggtccgaggaatggccgctggaat
ctcaggggaaagagattttataaacctgggacgatcaatggttatggtttgctatacatt
cctggtggacatggaatgcgtgtcgatgagagaggcattgacacctttactaagacatgt
ggccaacaattttcccattacggagtctcgacaaaccccagatgctccccccaatgggcc
atggccaatccacaaggggactttgagcgtcaaatccatgagctaatatccaagcttcag
accagaaatggtctcagaccgaatctcctaattttcatccttccaagtgtcgcagttgaa
ccatactgcactatcaagaaaatttgcgacacaaccttcggaattgcctcgcagtgcatg
gttttggagaaatgtttcaacccaaagggccagcttcagtacttggcgaatattgccctc
aaggtcaatgttaaacttggtggatctaatatggttattgacgacccctttctcatgaaa
cagccgacgatgattatgggttgcgatgcctcacatccgaatcccgcgcaacgcagaatg
gatcccccgccaccaacttttactgcgatctccgccagttatgaccgccgttgtgcaaag
tactcagcagttacgagttgtcaacccgctgggcaggagatgattcaggactttggtgcc
atgactcaagaattgttgaaacgcttccaggaacaggctaagcgtgacccttctgctata
atttacttccgcgatgggctttccgagagtgagcttgataaggttgttcgtagtgagctt
gcggagcttaagaaggttactaaagccaagatctcggtaattgtctgtgtgaagcgccat
catactcgtttctttccgcttgataagggtgataagaacgggaatattgccgttggtact
gtggttgaaaacggacacggcaaagatatcttcatggtttcacatgctggccttcaggga
accgttcgccctacccactacatgatgttgcacgatgagaacaatctcaccgctgtggac
tttcaacgcatttgtaacaacgtctgctatgcatatggacgtgctactgtttctgttagc
attgctccgccggtttactatgcgaacctagcatgtgaccgggctcgctcgcatgtcgtg
catactaaccagggacagagtgagcttttgcaagtccatgaccttctcaagtactctatg
tggtggcaatga
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