Phaeoacremonium minimum: UCRPA7_4457
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Entry
UCRPA7_4457 CDS
T03102
Name
(RefSeq) putative mrna cleavage factor complex component pcf11 protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
tmn
Phaeoacremonium minimum
Pathway
tmn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
UCRPA7_4457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmn03021
]
UCRPA7_4457
03019 Messenger RNA biogenesis [BR:
tmn03019
]
UCRPA7_4457
Transcription machinery [BR:
tmn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
UCRPA7_4457
Messenger RNA biogenesis [BR:
tmn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
UCRPA7_4457
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CFIA_Pcf11
zf_UBZ
DUF2076
zf-RRN7
zf-Di19
Motif
Other DBs
NCBI-GeneID:
19324910
NCBI-ProteinID:
XP_007915250
UniProt:
R8BL61
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MDNSLTLFIRRKHLPTRHLNQQHPPQLLHRINYHRMQLIDVSKADFARNPLDTSIQTRLK
ALLDLQKLLTSQNLPHDQLMLVKDRVTELAVAVKNQAPNSLTHAPTPPIAVQPYPPPQQV
PVAAPVAPNPPASAPPAGVSLDSLFGKGALATLLARQTPTPQVSTPYMPPAAVAPIRSPT
PQRVEPHKPTAPPPSDPMALLNMLRGAGILRGAPPAGGTPVNVTPVPPPPSAPPPIPPNL
ASILAAARGVVPPPPPQGGINSIELKASSLKLFRPHLLSLLYEDLGPPCTQCGRRFKTDD
EGKKKKTAHMDWHFRVHQRIAEAERRGQHRSWYVDERDWINSREVIDTDHVETSEESKGG
AASAASKAPKLKWIPVPDDGTNTVCPICQEKFEMKWLDEAQEWVWMDALRVGNRAYHASC
YAEAYKDGGSTPLYSRNTPEPVLGKRKAEVSPGSFKKIKA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggacaacagtcttaccctcttcatccggcgcaagcacctccctactcgacacctcaac
cagcagcatccgccccagctgctgcaccgtatcaactaccaccgcatgcaactaatcgat
gtttccaaggctgattttgcacggaatcctcttgatactagtatacaaacaagactgaag
gcgttgctggacttgcaaaagctcctgacgagccaaaatttgcctcatgaccagttgatg
ctcgttaaagaccgagtcactgagcttgctgttgccgtaaagaatcaagcccctaactcc
ctcacacacgcgcctacaccccctatcgccgtacaaccatatcctcctccacaacaagta
cccgtagcagcaccagtagctccgaatccgcctgcttcggcgcctccggcaggagtctcc
cttgactctctgttcggaaagggagctctggcgactctattggcgaggcagactcctacg
cctcaagtgtcaacaccatacatgccgccggctgccgtggcacccatacggtctccaaca
cctcagcgcgttgagccacacaaacctactgcacctccaccctcggaccctatggctctg
ctgaacatgctgagaggtgctggtatccttcgcggagctccaccggcaggcggtacacca
gtgaatgtaacaccggttcctcctccgccgtcagcgcctcctccgataccacctaatcta
gcctccatccttgctgctgcgaggggagttgtaccgcctccgcctccccaaggaggaatt
aatagcatcgagctgaaagcttcatcgctaaaactattccgacctcacctgttatccttg
ttgtacgaggacctcggtccgccatgtacacaatgtggcagacgcttcaagacagacgat
gaaggcaagaagaagaagacggcgcatatggactggcacttccgtgtgcatcagcggatc
gccgaggcggaaaggaggggccagcaccggagctggtatgttgatgagagggactggatc
aattcccgcgaagtcatcgatacagatcacgtagagacatcagaagagtcaaagggagga
gcagcgagcgcagcctcgaaggctcccaagctgaaatggatccctgttccggacgacggc
acgaacacggtgtgcccaatctgccaggagaagttcgagatgaagtggctcgacgaggct
caggagtgggtgtggatggatgctctccgagtcggcaaccgcgcatatcatgccagttgc
tacgctgaggcgtacaaggacggaggaagcacgccgctttactcgcgcaacacaccggag
ccggtgctcggcaagcggaaggcagaggtcagtcccggctcctttaagaagatcaaggct
tga
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