Phaeoacremonium minimum: UCRPA7_4626
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Entry
UCRPA7_4626 CDS
T03102
Name
(RefSeq) putative general negative regulator of transcription subunit 4 protein
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
tmn
Phaeoacremonium minimum
Pathway
tmn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UCRPA7_4626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tmn03000
]
UCRPA7_4626
03019 Messenger RNA biogenesis [BR:
tmn03019
]
UCRPA7_4626
04121 Ubiquitin system [BR:
tmn04121
]
UCRPA7_4626
Enzymes [BR:
tmn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
UCRPA7_4626
Transcription factors [BR:
tmn03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
UCRPA7_4626
Messenger RNA biogenesis [BR:
tmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
UCRPA7_4626
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
UCRPA7_4626
Ubiquitin system [BR:
tmn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
UCRPA7_4626
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
Rtf2
SET_assoc
zf-RING_2
Prok-RING_4
Nup35_RRM_2
Baculo_IE-1
zf-UDP
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
19325095
NCBI-ProteinID:
XP_007915368
UniProt:
R8BKF6
LinkDB
All DBs
Position
Unknown
AA seq
266 aa
AA seq
DB search
MAPQDTFFEEEDDTCPLCIEEFDLSDRNFRPCPCGYQVCQFCFNNIRNNMNGLCPACRRP
YDEKTIQWKMVTAEEVAEYKANVQKNRKKRAEVQGQKETQKRDTEKESRKNLVGIRVVQK
NLVYVTGLTPTVREDELLKTLRQPQFFGQYGNIQKISISNRKTSDGQHQSLGIYVTFEKK
EDAARCIQAVNGSQNGDRVLKAQLGTTKYCSAWLRHEQCTNRQCMFLHELGDEEDSYTRQ
DLSSLNSINSQRPTSNPAYGPFFQQG
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggctccacaagataccttttttgaagaagaggacgacacctgcccgctatgcatagaa
gagttcgacctttcagatcggaacttccgaccgtgtccatgcggataccaggtgtgccag
ttctgcttcaacaacatcaggaataacatgaatggtctgtgtcctgcttgccgaagacca
tacgatgagaagacaatacaatggaagatggttactgccgaagaggttgctgaatacaag
gccaacgtacaaaaaaatcgaaaaaagcgagccgaggtacaagggcaaaaagagactcag
aagcgagacaccgagaaggagagtcgcaagaacctcgtcggcattcgagtagtgcagaag
aatctggtatacgtcactggccttacgcctacggttcgggaagatgagctcttgaagacc
ctacgacagccgcagttcttcgggcaatacggtaacatccagaagatctctatcagcaac
cgtaaaacgtccgacggccaacatcaatctctcggcatctatgtgacgttcgagaagaag
gaggatgcggcacgctgtattcaagctgttaacggttcacaaaatggcgatagggttctc
aaagctcagctcggcacgacgaagtactgttctgcttggttgcggcacgaacagtgcacg
aatcggcagtgcatgttccttcatgagctgggcgacgaggaagatagctacaccagacaa
gatctttcctctctcaacagcatcaacagtcagcgtccaacatcgaaccccgcctatggt
ccgttcttccagcaaggatga
DBGET
integrated database retrieval system
