Phaeoacremonium minimum: UCRPA7_8694
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Entry
UCRPA7_8694 CDS
T03102
Name
(RefSeq) putative histone deacetylase rpd3 protein
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
tmn
Phaeoacremonium minimum
Pathway
tmn03082
ATP-dependent chromatin remodeling
tmn03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
UCRPA7_8694
03083 Polycomb repressive complex
UCRPA7_8694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tmn03036
]
UCRPA7_8694
Enzymes [BR:
tmn01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
UCRPA7_8694
Chromosome and associated proteins [BR:
tmn03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
UCRPA7_8694
HDAC complexes
Sin3A-HDAC complex
UCRPA7_8694
BRAF-HDAC complex
UCRPA7_8694
REST complex
UCRPA7_8694
SHIP complex
UCRPA7_8694
MiDAC complex
UCRPA7_8694
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
UCRPA7_8694
Heterochromatin formation proteins
Other heterochromatin formation proteins
UCRPA7_8694
Chromatin remodeling factors
NuRD complex
UCRPA7_8694
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
19329570
NCBI-ProteinID:
XP_007919396
UniProt:
R8B949
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MTDPAGVDRSHPLYSPVSVNKKRVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLVMNYNV
YKFLEVYRAKPAVFTEMTQFHTDEYIDFLQKVTPDNMDSYLKEQGKYNVGDDCPVFDGLF
EFCGISAGGSMEGAARLNRQKCDIAINWAGGLHHAKKSEASGFCYVNDIVLAIIELLRFK
KRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGELRDIGIGTGKNYAVNFP
LRDGITDASYKTIFEPVISAVMEYYQPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNF
VRGFGLPTLVLGGGGYTMRNVARTWAYETGRLVGVEMDPVLPYNEYYDYYGPDYELNVRP
SNMENANSTDYLEKIKIAVIENLKKTAPVPSVQMQDTPRQGLGMTDEEEAELDDLDEDEH
KDERVTQRQWEKSITREDEFEESDDEDMATANGVHKTNGKRMGIMDYKNPHADTDMDSGA
ITPVNGQRDGSVAPAAEDEPEAENENHDGDETMEDVEAQPKDVAVDATNEDKPAEPAAKV
DNDGDVDMEAAAEPETTIKQEETEPAPASEDKVASPKATEEPKDKETGSPKASAEPEKAT
TPAQGSDKMEVEVKDDAPAASAEPDKEKES
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcccgcgggagtcgaccgctcccatcctctctacagcccggtgagcgtgaac
aagaaacgagtcgcctacttctacgactctgatatcggcaattatgcctacgtcaccggc
catcctatgaagcctcatcgtatcaggctggcgcatagcttggtcatgaattacaatgtc
tacaagtttctggaggtctatcgcgcgaagcccgctgtctttactgagatgacccaattt
cataccgacgagtacatcgacttcctccagaaggtcacaccagacaacatggacagttac
ttaaaagagcagggcaaatacaatgtcggagatgattgtcccgtgttcgatggcctgttc
gagttctgcggtatcagcgctggtggtagcatggagggtgccgcccgtttgaaccgccaa
aagtgcgacattgcaatcaattgggctggtggtctacatcacgccaagaagagcgaagct
agcgggttctgctacgtgaatgatattgttcttgccatcattgagctcctccgattcaag
aagcgcgtcttgtacatcgacattgatgtccaccacggagatggcgttgaggaggccttc
tacacaaccgaccgtgtcatgaccgtctccttccacaaatacggcgagtacttcccaggt
actggtgagctgcgcgacattggtatcggcacaggcaagaactatgccgtcaactttcct
ctccgcgacggtatcaccgacgcctcttacaagaccatcttcgagcctgtcatctctgct
gtcatggagtactatcaaccggaggcagtcgtcctccagtgtggtggtgacagcttgtct
ggtgaccgacttggctgcttcaatctgagcatgcgaggacatgccaattgcgttaacttc
gtgcgtggttttggactcccgactcttgttctcggcggtggtggctacacaatgcgaaac
gttgcccgaacatgggcttacgagaccggtcgtcttgttggcgtcgagatggatcctgtc
ctgccgtacaatgagtactatgactattatggtcccgactatgagctcaacgtccgtccc
tccaacatggagaatgcgaatagcaccgattacctcgagaagatcaagattgcagtcatc
gagaacctgaagaagacagcccctgtgccgtccgtgcagatgcaggacaccccgcgtcag
ggactcggtatgaccgacgaggaggaggcagaacttgacgatcttgatgaagacgagcat
aaggacgaacgggtcacccagcgccagtgggagaagagcatcacccgcgaagacgagttc
gaagagagcgacgatgaggatatggctactgcgaatggcgttcacaagaccaacggcaaa
agaatgggcattatggactacaaaaacccgcatgctgatacggatatggacagtggcgct
attaccccagtaaacggacaacgggatggttcagtggctccagctgccgaggacgagccc
gaggcggagaatgagaatcacgatggtgatgagacaatggaggatgtcgaggctcagcca
aaggatgtggccgttgacgccacaaatgaggacaagcccgccgaaccagctgccaaggtc
gataacgatggcgatgttgacatggaagccgcagctgaacctgagacgaccatcaagcaa
gaggagacagagcccgccccagcctctgaggacaaggtggcaagccccaaggccactgaa
gagcccaaggacaaggagacaggctcaccaaaggcatctgccgagcctgagaaggctacc
actcccgcgcaaggcagcgacaagatggaagttgaggtgaaagatgacgcccccgctgct
tcagcagagcccgacaaggagaaggaatcctag
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